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zwang's structure [109 articles]

当前文献位于 zwang's 文献库 标签分类为 structure. You can also see everyone's structure.
  • Efficient Algorithms for Probing the RNA Mutation Landscape
    PLoS Comput Biol, Vol. 4, No. 8. (2008), e1000124.
    by Jérôme Waldispühl, Srinivas Devadas, Bonnie Berger, Peter Clote
    posted to mutation rna secondary structure by zwang on 2008-08-30 03:59:05 as **
  • Evolution of complex structures: minicollagens shape the cnidarian nematocyst
    Trends in Genetics, Vol. 24, No. 9. (September 2008), pp. 431-438.
    by Charles N David, Suat Özbek, Patrizia Adamczyk, Sebastian Meier, Barbara Pauly, Jarrod Chapman, Jung S Hwang, Takashi Gojobori, Thomas W Holstein
    posted to complex evolution structure by zwang on 2008-08-27 09:25:05 as **
  • The dual-basin landscape in GFP folding
    Proceedings of the National Academy of Sciences, Vol. 105, No. 34. (2008), pp. 12283-12288.
    by Benjamin T Andrews, Shachi Gosavi, John M Finke, José N Onuchic, Patricia A Jennings
    posted to fluorescent folding protein structure by zwang on 2008-08-27 09:02:08 as **
  • Optimal Design of Thermally Stable Proteins
    Bioinformatics (22 August 2008), btn450.
    by Vanitha Suresh, Ryan M Bannen, George N Phillips, Stephen J Wright, Julie C Mitchell
    posted to design prediction protein structure by zwang on 2008-08-27 07:30:16 as ** along with 1 person phoenixzxl
  • Structural basis for translation termination on the 70S ribosome
    Nature (02 July 2008)
    by Martin Laurberg, Haruichi Asahara, Andrei Korostelev, Jianyu Zhu, Sergei Trakhanov, Harry F Noller
    posted to complex protein structure by zwang on 2008-08-15 01:52:22 as **
  • Structural basis for the selectivity of the external thioesterase of the surfactin synthetase
    Nature, Vol. 454, No. 7206., pp. 907-911.
    by Alexander Koglin, Frank Löhr, Frank Bernhard, Vladimir V Rogov, Dominique P Frueh, Eric R Strieter, Mohammad R Mofid, Peter Güntert, Gerhard Wagner, Christopher T Walsh, Mohamed A Marahiel, Volker Dötsch
    posted to protein structure by zwang on 2008-08-15 01:51:57 as **
  • Dynamic energy landscape view of coupled binding and protein conformational change: Induced-fit versus population-shift mechanisms
    Proceedings of the National Academy of Sciences, Vol. 105, No. 32. (2008), pp. 11182-11187.
    by Kei-Ichi Okazaki, Shoji Takada
    posted to binding protein structure by zwang on 2008-08-14 07:25:41 as *
  • Coevolution at protein complex interfaces can be detected by the complementarity trace with important impact for predictive docking.
    Proceedings of the National Academy of Sciences of the United States of America (29 May 2008)
    by Hocine Madaoui, Raphaël Guerois
    posted to co-evolution interaction interface prediction structure by zwang on 2008-08-06 07:42:22 as *** along with 4 people cabbagesofdoom phoenixzxl bicko chad_davis
  • RNase P cleaves transient structures in some riboswitches
    posted to ribozyme rnasep structure by zwang on 2008-08-05 01:48:12 as **
  • Molecular architecture of native HIV-1 gp120 trimers
    posted to complex structure by zwang on 2008-07-31 06:20:24 as ****
  • Predicting and Validating Protein Interactions Using Network Structure
    PLoS Comput Biol, Vol. 4, No. 7. (25 July 2008), e1000118.
    by Pao-Yang Chen, Charlotte M Deane, Gesine Reinert
    posted to interaction network prediction protein structure by zwang on 2008-07-30 03:51:04 as **** along with 4 people icq242500260 phoenixzxl roys mingzhi
  • The structural basis for an essential subunit interaction in influenza virus RNA polymerase
    posted to complex influenza interaction structure by zwang on 2008-07-30 03:44:26 as **
  • PIGS: Automatic prediction of antibody structures
    Bioinformatics (19 July 2008), btn341.
    by Paolo Marcatili, Alessandra Rosi, Anna Tramontano
    posted to antibody prediction structure by zwang on 2008-07-26 10:47:53 as ***
  • Predicting protein folding pathways at the mesoscopic level based on native interactions between secondary structure elements
    BMC Bioinformatics, Vol. 9 (23 July 2008), 320.
    by Qingwu Yang, Sing-Hoi Sze
    posted to folding interaction prediction protein structure by zwang on 2008-07-26 10:43:26 as *
  • Molecular Engineering of Viral Gene Delivery Vehicles
    Annual Review of Biomedical Engineering, Vol. 10, No. 1. (2008), pp. 169-194.
    by David V Schaffer, James T Koerber, Kwang I Lim
    posted to gene structure virus by zwang on 2008-07-23 07:11:52 as **
  • A Dominant Conformational Role for Amino Acid Diversity in Minimalist Protein-Protein Interfaces
    Journal of Molecular Biology, Vol. 381, No. 2. (29 August 2008), pp. 407-418.
    by Ryan N Gilbreth, Kaori Esaki, Akiko Koide, Sachdev S Sidhu, Shohei Koide
    posted to interaction interface protein structure by zwang on 2008-07-18 04:02:00 as ** along with 2 people mapplab phoenixzxl
  • Analyzing Protein Interaction Networks Using Structural Information
    Annual Review of Biochemistry, Vol. 77, No. 1. (2008)
    by Christina Kiel, Pedro Beltrao, Luis Serrano
    posted to interaction network protein review structure by zwang on 2008-07-16 04:11:11 as **** along with 7 people Borelli bicko neils Evangelia grahamc paolomarcatili phoenixzxl
  • Protein-Protein Interactions in the Membrane: Sequence, Structural, and Biological Motifs
    Structure, Vol. 16, No. 7. (9 July 2008), pp. 991-1001.
    by David T Moore, Bryan W Berger, William F Degrado
    posted to interaction protein structure by zwang on 2008-07-14 02:46:16 as ** along with 2 people neils jonsta247
  • Implications for kinetochore-microtubule attachment from the structure of an engineered Ndc80 complex.
    Cell, Vol. 133, No. 3. (2 May 2008), pp. 427-439.
    by C Ciferri, S Pasqualato, E Screpanti, G Varetti, S Santaguida, G Dos Reis, A Maiolica, J Polka, JG De Luca, P De Wulf, M Salek, J Rappsilber, CA Moores, ED Salmon, A Musacchio
    posted to complex structure by zwang on 2008-07-10 09:23:58 as **
  • Structural and Functional Studies of Nup107/Nup133 Interaction and Its Implications for the Architecture of the Nuclear Pore Complex
    Molecular Cell, Vol. 30, No. 6. (20 June 2008), pp. 721-731.
    by Thomas Boehmer, Sandra Jeudy, Ian C Berke, Thomas U Schwartz
    posted to complex interaction structure by zwang on 2008-07-07 04:18:01 as **
  • Structural Basis for the Cooperation of Hsp70 and Hsp110 Chaperones in Protein Folding
    Cell, Vol. 133, No. 6. (13 June 2008), pp. 1068-1079.
    by Sigrun Polier, Zdravko Dragovic, Ulrich F Hartl, Andreas Bracher
    posted to folding structure by zwang on 2008-07-07 04:17:04 as **
  • Importin-[beta]: Structural and Dynamic Determinants of a Molecular Spring
    Structure, Vol. 16, No. 6. (11 June 2008), pp. 906-915.
    by Ulrich Zachariae, Helmut Grubmüller
    posted to structure by zwang on 2008-07-07 04:14:27 as * along with 1 person choonpeng
  • A generative, probabilistic model of local protein structure
    Proceedings of the National Academy of Sciences, Vol. 105, No. 26. (1 July 2008), pp. 8932-8937.
    by Wouter Boomsma, Kanti V Mardia, Charles C Taylor, Jesper Ferkinghoff-Borg, Anders Krogh, Thomas Hamelryck
    posted to modeling protein structure by zwang on 2008-07-02 11:49:14 as * along with 3 people biehl apaydin mijam
  • Using multiple templates to improve quality of homology models in automated homology modeling
    Protein Sci, Vol. 17, No. 6. (1 June 2008), pp. 990-1002.
    by Per Larsson, Bjorn Wallner, Erik Lindahl, Arne Elofsson
    posted to homologymodeling structure by zwang on 2008-07-01 08:51:22 as **
  • Structural specificity in coiled-coil interactions
    Current Opinion in Structural Biology, Vol. In Press, Corrected Proof
    by Gevorg Grigoryan, Amy E Keating
    posted to coil interaction structure by zwang on 2008-06-27 03:58:27 as ** along with 3 people phoenixzxl marck viktor21614
  • Protein model refinement using an optimized physics-based all-atom force field
    Proceedings of the National Academy of Sciences, Vol. 105, No. 24. (17 June 2008), pp. 8268-8273.
    by Anna Jagielska, Liliana Wroblewska, Jeffrey Skolnick
    posted to protein structure by zwang on 2008-06-27 03:37:45 as ** along with 3 people and 2 groups RamuAnandakrishnan jmccammon barry structural_bioinformatics McCammon
  • Progress and challenges in protein structure prediction
    Current Opinion in Structural Biology, Vol. 18, No. 3. (June 2008), pp. 342-348.
    by Yang Zhang
    posted to prediction protein structure by zwang on 2008-06-27 03:37:25 as ** along with 2 people phoenixzxl marck
  • Assembly reflects evolution of protein complexes
    Nature (18 June 2008)
    by Emmanuel D Levy, Elisabetta B Erba, Carol V Robinson, Sarah A Teichmann
    posted to complex evolution protein structure by zwang on 2008-06-27 03:35:25 as **** along with 7 people psique marck paulschlesinger neils jwm faion phoenixzxl
  • Direct observation of fast protein conformational switching
    Proceedings of the National Academy of Sciences, Vol. 105, No. 25. (24 June 2008), pp. 8619-8624.
    by Haruto Ishikawa, Kyungwon Kwak, Jean K Chung, Seongheun Kim, Michael D Fayer
    posted to protein structure by zwang on 2008-06-25 05:44:14 as **
  • Predicting novel RNA-RNA interactions.
    Current opinion in structural biology (14 May 2008)
    by Irmtraud M M Meyer
    posted to interaction prediction rna structure by zwang on 2008-06-16 03:49:12 as ***** along with 1 person marck
  • Implications from a Network-Based Topological Analysis of Ubiquitin Unfolding Simulations
    PLoS ONE, Vol. 3, No. 5. (14 May 2008), e2149.
    by Arun Krishnan, Alessandro Giuliani, Joseph P Zbilut, Masaru Tomita
    posted to folding network protein simulation structure by zwang on 2008-06-16 01:54:32 as ** along with 1 person phoenixzxl
  • Recent Progress and Future Directions in Protein-Protein Docking
    posted to docking protein structure by zwang on 2008-05-09 02:42:39 as **
  • 3D structure of the influenza virus polymerase complex: Localization of subunit domains
    Proceedings of the National Academy of Sciences, Vol. 101, No. 1. (6 January 2004), pp. 308-313.
    by Estela Area, Jaime Martin-Benito, Pablo Gastaminza, Eva Torreira, Jose M Valpuesta, Jose L Carrascosa, Juan Ortin
    posted to complex influenza structure by zwang on 2008-05-09 02:38:39 as **
  • Multiple Routes and Structural Heterogeneity in Protein Folding
    Annual Review of Biophysics, Vol. 37, No. 1. (2008), pp. 489-510.
    by Jayant B Udgaonkar
    posted to folding protein structure by zwang on 2008-05-08 09:59:05 as **
  • Structural Principles from Large RNAs
    Annual Review of Biophysics, Vol. 37, No. 1. (2008)
    by Stephen R Holbrook
    posted to rna secondary structure by zwang on 2008-05-08 09:57:07 as *****
  • Structure of Eukaryotic RNA Polymerases
    Annual Review of Biophysics, Vol. 37, No. 1. (2008), pp. 337-352.
    by P Cramer, KJ Armache, S Baumli, S Benkert, F Brueckner, C Buchen, GE Damsma, S Dengl, SR Geiger, AJ Jasiak, A Jawhari, S Jennebach, T Kamenski, H Kettenberger, CD Kuhn, E Lehmann, K Leike, JF Sydow, A Vannini
    posted to eukaryota rna structure by zwang on 2008-05-08 09:54:27 as **
  • Riboswitches: Emerging Themes in RNA Structure and Function
    Annual Review of Biophysics, Vol. 37, No. 1. (2008), pp. 117-133.
    by Rebecca K Montange, Robert T Batey
    posted to rna structure by zwang on 2008-05-08 09:48:18 as ****
  • Using structural analysis to generate parasite-selective monoclonal antibodies
    Protein Sci (14 April 2008), ps.073429808.
    by Michael A Kron, Sam Cichanowicz, Angela Hendrick, Aizhuo Liu, Joseph Leykam, Leslie A Kuhn
    posted to antibody immunity structure by zwang on 2008-04-15 02:16:08 as **
  • Detecting evolutionary relationships across existing fold space, using sequence order-independent profile-profile alignments
    Proceedings of the National Academy of Sciences, Vol. 105, No. 14. (8 April 2008), pp. 5441-5446.
    by Lei Xie, Philip E Bourne
    posted to alignment evolution profile sequence structure by zwang on 2008-04-09 03:58:23 as ** along with 1 person and 1 group sobolevnrm baker-group
  • From the Cover: Consistent blind protein structure generation from NMR chemical shift data
    Proceedings of the National Academy of Sciences, Vol. 105, No. 12. (25 March 2008), pp. 4685-4690.
    by Yang Shen, Oliver Lange, Frank Delaglio, Paolo Rossi, James M Aramini, Gaohua Liu, Alexander Eletsky, Yibing Wu, Kiran K Singarapu, Alexander Lemak, Alexandr Ignatchenko, Cheryl H Arrowsmith, Thomas Szyperski, Gaetano T Montelione, David Baker, Ad Bax
    posted to nmr protein structure by zwang on 2008-03-27 14:26:51 as * along with 5 people and 1 group biehl sunhwan skoddet apaydin dgront Nielsen group
  • The role of disorder in interaction networks: a structural analysis
    Mol Syst Biol, Vol. 4 (25 March 2008)
    by Philip M Kim, Andrea Sboner, Yu Xia, Mark Gerstein
    posted to interaction network structure by zwang on 2008-03-27 05:09:26 as ** along with 5 people bootsy biomcgary maralena phoenixzxl chad_davis
  • The long coming of computational structural biology
    Journal of Structural Biology, Vol. In Press, Accepted Manuscript
    by Andrei N Lupas
    posted to computational structure by zwang on 2008-03-20 13:25:51 as ** along with 1 person and 1 group psique psique blog references
  • Correlated substitution analysis and the prediction of amino acid structural contacts
    Brief Bioinform (13 November 2007), bbm052.
    by David S Horner, Walter Pirovano, Graziano Pesole
    posted to co-evolution contact prediction structure substitution by zwang on 2008-03-20 13:25:08 as *** along with 3 people and 3 groups barry sobolevnrm Lombardo_7 structural_bioinformatics Bioinformatics baker-group
  • PLoS Computational Biology: Evolutionary Patterns in the Sequence and Structure of Transfer RNA: Early Origins of Archaea and Viruses
    posted to archaea evolution rna sequence structure virus by zwang on 2008-03-20 13:24:28 as **
  • Structural inference of native and partially folded RNA by high-throughput contact mapping
    Proceedings of the National Academy of Sciences, Vol. 105, No. 11. (18 March 2008), pp. 4144-4149.
    by Rhiju Das, Madhuri Kudaravalli, Magdalena Jonikas, Alain Laederach, Robert Fong, Jason P Schwans, David Baker, Joseph A Piccirilli, Russ B Altman, Daniel Herschlag
    posted to contact folding rna structure by zwang on 2008-03-20 13:00:39 as ***** along with 1 person and 1 group wsjames Oxford Virology
  • The structure of protein evolution and the evolution of protein structure
    Current Opinion in Structural Biology, Vol. In Press, Corrected Proof
    by Richard A Goldstein
    posted to evolution protein structure by zwang on 2008-03-11 01:11:59 as *** along with 2 people bpb cmzmasek
  • The MC-Fold and MC-Sym pipeline infers RNA structure from sequence data
    Nature, Vol. 452, No. 7183., pp. 51-55.
    by Marc Parisien, François Major
    posted to prediction rna sequence structure by zwang on 2008-03-07 02:48:26 as *** along with 3 people austin elfar reyez
  • PLoS Computational Biology: Accurate Structural Correlations from Maximum Likelihood Superpositions
    posted to likelihood structure by zwang on 2008-03-03 04:35:44 as ** along with 1 person and 1 group sobolevnrm baker-group
  • Crystal Structure of Unliganded Influenza B Virus Hemagglutinin
    J. Virol., Vol. 82, No. 6. (15 March 2008), pp. 3011-3020.
    by Qinghua Wang, Feng Cheng, Mingyang Lu, Xia Tian, Jianpeng Ma
    posted to influenza structure virus by zwang on 2008-02-26 06:16:03 as ***
  • A fast structural multiple alignment method for long RNA sequences
    BMC Bioinformatics, Vol. 9 (23 January 2008), 33.
    by Yasuo Tabei, Hisanori Kiryu, Taishin Kin, Kiyoshi Asai
    posted to alignment rna sequence structure by zwang on 2008-02-24 13:44:59 as ***** along with 1 person mtagaya
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