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Core formal molecular biology

by: V Danos, C Laneve
(2003)


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A core modeling language for Molecular Biology is introduced, where two simple forms of interaction are considered, complexation and activation. This core language is equipped with two sensible bisimulation-based equivalences, and it is shown that interactions involving complex reactants are superfluous up to these notions. Strong compilations in #-calculus are given, following Regev's principle of translating physical connection as private name sharing.


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