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winterschlaefer's ppi [18 articles]

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  • Using protein complexes to predict phenotypic effects of gene mutation
    Genome Biology, Vol. 8 (27 November 2007), R252.
    by Hunter B Fraser, Joshua B Plotkin
    posted to ppi phenotype complexes by winterschlaefer on 2008-10-24 13:07:14 as ** along with 5 people diamantis grahamc ramensky jiny bpcusack
  • Conservation and topology of protein interaction networks under duplication-divergence evolution.
    Proceedings of the National Academy of Sciences of the United States of America (16 July 2008)
    by Kirill Evlampiev, Hervé Isambert
    posted to ppi network evolution by winterschlaefer on 2008-10-20 17:14:39 as ** along with 2 people Garamonfok bpcusack
  • High-confidence prediction of global interactomes based on genome-wide coevolutionary networks
    Proceedings of the National Academy of Sciences (16 January 2008), 0709671105.
    by David Juan, Florencio Pazos, Alfonso Valencia
    posted to prediction ppi coevolution by winterschlaefer on 2008-10-19 15:56:54 as ** along with 14 people and 1 group marti tmmurali brant balicea sebastien_vigneau bluto cjeans aconesa Katje roys friendpine huali mdstobbe paolomarcatili microbiology_nijmegen
  • Predicting protein-protein interactions based only on sequences information
    PNAS, Vol. 104, No. 11. (13 March 2007), pp. 4337-4341.
    by Juwen Shen, Jian Zhang, Xiaomin Luo, Weiliang Zhu, Kunqian Yu, Kaixian Chen, Yixue Li, Hualiang Jiang
    posted to sequence prediction ppi by winterschlaefer on 2008-10-08 13:33:16 as ** along with 6 people and 1 group samjlord Dualsystems ruvido cjeans huyun110 phoenixzxl moernerlab
  • Network-based classification of breast cancer metastasis
    Mol Syst Biol, Vol. 3 (16 October 2007)
    by Han-Yu Chuang, Eunjung Lee, Yu-Tsueng Liu, Doheon Lee, Trey Ideker
    posted to ppi microarray cancer by winterschlaefer on 2008-10-08 09:59:50 as ** along with 20 people and 3 groups ggallone giovenko isimpson ihpark bertelsen jfr kengg frohike mikaelhuss cjeans zwang cerami abhattac shikin oelemento roys ptrobajo dap5087 saman_vp verdicchio Jarman Lab Bioinformatics GeneGo
  • An assessment of the uses of homologous interactions
    Bioinformatics (27 November 2007), btm576.
    by Ramazan Saeed, Charlotte Deane
    posted to ppi orthology by winterschlaefer on 2008-10-06 11:49:35 as ** along with 8 people chad_davis grahamc cjeans laughcry mingzhi cdeane Pao-Yang samesense
  • Predicting disease genes using protein-protein interactions.
    J Med Genet, Vol. 43, No. 8. (August 2006), pp. 691-698.
    by M Oti, B Snel, MA Huynen, HG Brunner
    posted to ppi disease by winterschlaefer on 2008-09-12 16:03:28 as ** along with 6 people diamantis bicko jiny svdate xingxu balicea
  • Characterization of Protein Hubs by Inferring Interacting Motifs from Protein Interactions
    PLoS Computational Biology, Vol. 3, No. 9. (1 September 2007), e178.
    by Ramon Aragues, Andrej Sali, Jaume Bonet, Marc A Marti-Renom, Baldo Oliva
    posted to hubs motif ppi by winterschlaefer on 2008-05-11 12:17:02 as ** along with 2 people zwang Ema
  • Principles of Protein-Protein Interactions: What are the Preferred Ways For Proteins To Interact?
    Chem. Rev. (21 March 2008)
    by O Keskin, A Gursoy, B Ma, R Nussinov
    posted to ppi by winterschlaefer on 2008-05-09 12:32:53 as ** along with 5 people and 1 group jmrivort higueruelo allmensch GermanErlenkamp kintoki Supramolecular
  • Structure-Templated Predictions of Novel Protein Interactions from Sequence Information
    PLoS Computational Biology, Vol. 3, No. 9. (1 September 2007), e182.
    by Doron Betel, Kevin E Breitkreuz, Ruth Isserlin, Danielle Dewar-Darch, Mike Tyers, Christopher W Hogue
    posted to ppi prediction structure by winterschlaefer on 2008-04-24 13:46:44 as ** along with 3 people agustinarce cjeans zwang
  • Still Stratus Not Altocumulus: Further Evidence against the Date/Party Hub Distinction
    PLoS Biology, Vol. 5, No. 6. (1 June 2007), e154.
    by Nizar N Batada, Teresa Reguly, Ashton Breitkreutz, Lorrie Boucher, Bobby-Joe Breitkreutz, Laurence D Hurst, Mike Tyers
    posted to hubs ppi by winterschlaefer on 2008-03-03 10:42:40 as ** along with 3 people carlk antonkratz cdeane
  • Confirmation of Organized Modularity in the Yeast Interactome
    PLoS Biology, Vol. 5, No. 6. (1 June 2007), e153.
    by Nicolas Bertin, Nicolas Simonis, Denis Dupuy, Michael E Cusick, Jing-Dong J Han, Hunter B Fraser, Frederick P Roth, Marc Vidal
    posted to hubs ppi by winterschlaefer on 2008-03-03 10:41:41 as ** along with 1 person kintoki
  • Stratus Not Altocumulus: A New View of the Yeast Protein Interaction Network.
    PLoS Biol, Vol. 4, No. 10. (19 September 2006)
    by Nizar N N Batada, Teresa Reguly, Ashton Breitkreutz, Lorrie Boucher, Bobby-Joe J Breitkreutz, Laurence D D Hurst, Mike Tyers
    posted to hubs ppi by winterschlaefer on 2008-03-03 10:40:57 as ** along with 6 people aswin jpoyatos iris_2001 Evangelia carlk cdeane
  • Evidence for dynamically organized modularity in the yeast protein-protein interaction network
    Nature, Vol. 430, No. 6995. (01 July 2004), pp. 88-93.
    by Jing-Dong J Han, Nicolas Bertin, Tong Hao, Debra S Goldberg, Gabriel F Berriz, Lan V Zhang, Denis Dupuy, Albertha JM Walhout, Michael E Cusick, Frederick P Roth, Marc Vidal
    posted to hubs ppi by winterschlaefer on 2008-03-03 10:39:28 as ** along with 26 people and 2 groups lawraga diamantis davidecellai dragonrez lfriedl balajis yoh j3xucite kintoki koller mikaelhuss ruvido gcalda grahamc iris_2001 lpfernandes Evangelia cdeane shung phoenixzxl stefanoallesina ellakat frohike shikin ksiek carlk kdl GeneGo
  • Specificity in protein interactions and its relationship with sequence diversity and coevolution.
    Proc Natl Acad Sci U S A (27 April 2007)
    by Luke Hakes, Simon C C Lovell, Stephen G G Oliver, David L L Robertson
    posted to evolution ismb08 ppi by winterschlaefer on 2008-02-17 16:48:12 as ** along with 11 people and 2 groups dullhunk marti stevanspringer bjorns cjeans zwang Garamonfok cursonivel1 tale phoenixzxl chrys FAB-lab cursonivel1
  • Coverage and error models of protein-protein interaction data by directed graph analysis
    Genome Biology, Vol. 8 (10 September 2007), R186.
    by Tony Chiang, Denise Scholtens, Deepayan Sarkar, Robert Gentleman, Wolfgang Huber
    posted to error ppi by winterschlaefer on 2007-09-18 10:33:02 as ** along with 5 people Yanno jfr chad_davis grahamc Pao-Yang
  • A network of protein-protein interactions in yeast.
    Nat Biotechnol, Vol. 18, No. 12. (December 2000), pp. 1257-1261.
    by B Schwikowski, P Uetz, S Fields
    posted to high-throughput ppi yeast by winterschlaefer on 2007-08-27 10:51:26 as ** along with 5 people davidecellai dragonrez ichbins81 jiny carlk
  • Unequal evolutionary conservation of human protein interactions in interologous networks
    Genome Biology, Vol. 8 (29 May 2007), R95.
    by Kevin R Brown, Igor Jurisica
    posted to evolution interologs ppi by winterschlaefer on 2007-08-24 11:21:34 as ** along with 3 people and 1 group diamantis grahamc zwang ParkinsonLab_at_MaRS
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