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waszak's 关注列表 [73 articles]

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  • Detection of DNA copy number alterations in cancer by array comparative genomic hybridization.
    Genet Med, Vol. 9, No. 9. (September 2007), pp. 574-584.
    by E Michels, K De Preter, N Van Roy, F Speleman
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-09-19 04:02:58 as ***** along with 2 people frohike hpaces
  • A bayesian approach to copy-number-polymorphism analysis in nuclear pedigrees.
    Am J Hum Genet, Vol. 81, No. 4. (October 2007), pp. 808-812.
    by K Kosta, I Sabroe, J Goke, RJ Nibbs, J Tsanakas, MK Whyte, MD Teare
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-09-13 09:03:07 as *** along with 1 person and 1 group breden SFUAntibodyResearch
  • GENOMICS: DNA Duplications and Deletions Help Determine Health.
    Science, Vol. 317, No. 5843. (7 September 2007), pp. 1315-1317.
    by J Cohen
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-09-09 14:26:39 as ** along with 2 people and 3 groups dchughes ealloza G4ID BioinfoCIPF Genetics-of-Gambling
  • The Diploid Genome Sequence of an Individual Human
    PLoS Biology, Vol. 5, No. 10. (1 October 2007), e254.
    by Samuel Levy, Granger Sutton, Pauline C Ng, Lars Feuk, Aaron L Halpern, Brian P Walenz, Nelson Axelrod, Jiaqi Huang, Ewen F Kirkness, Gennady Denisov, Yuan Lin, Jeffrey R Macdonald, Andy W Pang, Mary Shago, Timothy B Stockwell, Alexia Tsiamouri, Vineet Bafna, Vikas Bansal, Saul A Kravitz, Dana A Busam, Karen Y Beeson, Tina C Mcintosh, Karin A Remington, Josep F Abril, John Gill, Jon Borman, Yu-Hui Rogers, Marvin E Frazier, Stephen W Scherer, Robert L Strausberg, Craig J Venter
    posted to genomics cnv by sleepingcell to the group Bioinformatics on 2007-09-08 05:32:46 as ** along with 22 people jo_davies frohike adijr Neeperando operon carlblesius bpb balicea skhadar dullhunk djkt jackjackjjj ramensky massivemayhem jasonbobe PredictER lp2 cabbagezs xingxu hpaces maburkitt nhp
  • Challenges and standards in integrating surveys of structural variation.
    Nat Genet, Vol. 39, No. 7 Suppl. (July 2007)
    by SW Scherer, C Lee, E Birney, DM Altshuler, EE Eichler, NP Carter, ME Hurles, L Feuk
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-09-07 06:34:30 as ***** along with 5 people jyuh bpb rdiaz jlangdon jasonflannick
  • Methods and strategies for analyzing copy number variation using DNA microarrays.
    Nat Genet, Vol. 39, No. 7 Suppl. (July 2007)
    by NP Carter
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-09-07 06:32:50 as ***** along with 5 people jo_davies jyuh jfr mrkrause rdiaz
  • Assessing the Significance of Conserved Genomic Aberrations Using High Resolution Genomic Microarrays
    PLoS Genetics, Vol. 3, No. 8. (1 August 2007), e143.
    by Mitchell Guttman, Carolyn Mies, Katarzyna Dudycz-Sulicz, Sharon J Diskin, Don A Baldwin, Christian J Stoeckert, Gregory R Grant
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-08-30 09:47:49 as ***** along with 4 people and 1 group jfr rdiaz ealloza zwang BioinfoCIPF
  • Sensitive and Specific Real-Time Polymerase Chain Reaction Assays to Accurately Determine Copy Number Variations (CNVs) of Human Complement C4A, C4B, C4-Long, C4-Short, and RCCX Modules: Elucidation of C4 CNVs in 50 Consanguineous Subjects with Defined HLA Genotypes.
    J Immunol, Vol. 179, No. 5. (1 September 2007), pp. 3012-3025.
    by Yee Ling L Wu, Stephanie L L Savelli, Yan Yang, Bi Zhou, Brad H H Rovin, Daniel J J Birmingham, Haikady N N Nagaraja, Lee A A Hebert, C Yung Y Yu
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-08-23 08:16:52 as *****
  • Analysis of Array CGH Data for Cancer Studies Using Fused Quantile Regression.
    Bioinformatics (20 July 2007)
    by Youjuan Li, Ji Zhu
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-08-06 08:19:09 as ** along with 2 people rdiaz shigepong
  • Optimized design and assessment of whole genome tiling arrays.
    Bioinformatics, Vol. 23, No. 13. (1 July 2007)
    by Stefan Gräf, Fiona G G G Nielsen, Stefan Kurtz, Martijn A A Huynen, Ewan Birney, Henk Stunnenberg, Paul Flicek
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-08-06 08:18:56 as **
  • Modeling recurrent DNA copy number alterations in array CGH data.
    Bioinformatics, Vol. 23, No. 13. (1 July 2007)
    by SP Shah, WL Lam, RT Ng, KP Murphy
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-08-06 08:09:31 as ** along with 2 people frohike pcarbo
  • Robust smooth segmentation approach for array CGH data analysis.
    Bioinformatics (27 July 2007)
    by Jian Huang, Arief Gusnanto, Kathleen O'sullivan, Johan Staaf, Ake Borg, Yudi Pawitan
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-08-04 06:30:44 as ** along with 2 people rdiaz shigepong
  • Array CGH analysis of copy number variation identifies 1284 new genes variant in healthy white males: implications for association studies of complex diseases.
    Hum Mol Genet (31 July 2007)
    by Adam J de J Smith, Anya Tsalenko, Nick Sampas, Alicia Scheffer, N Alice A Yamada, Peter Tsang, Amir Ben-Dor, Zohar Yakhini, Richard J J Ellis, Laurakay Bruhn, Stephen Laderman, Philippe Froguel, Alexandra If I Blakemore
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-08-03 02:30:22 as *** along with 1 person giovanni
  • Gene copy number variation spanning 60 million years of human and primate evolution.
    Genome Res (31 July 2007)
    by Laura Dumas, Young H H Kim, Anis Karimpour-Fard, Michael Cox, Janet Hopkins, Jonathan R R Pollack, James M M Sikela
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-08-03 02:30:03 as *** along with 5 people and 2 groups brian balicea dchughes cabbagezs ljs G4ID Genetics-of-Gambling
  • Copy-number variations and human disease.
    Am J Hum Genet, Vol. 81, No. 2. (August 2007), pp. 414-415.
    by RA Hegele
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-08-03 02:29:41 as ***
  • Numbers of Copy-Number Variations and False-Negative Rates Will Be Underestimated If We Do Not Account for the Dependence between Repeated Experiments.
    Am J Hum Genet, Vol. 81, No. 2. (August 2007), pp. 418-420.
    by AG Lynch, JC Marioni, S Tavare
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-08-03 02:29:20 as ****
  • Flexible and Accurate Detection of Genomic Copy-Number Changes from aCGH.
    PLoS Comput Biol, Vol. 3, No. 6. (22 June 2007)
    by Oscar M M Rueda, Ramón Díaz-Uriarte
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-07-17 16:31:01 as ** along with 2 people jfr shigepong
  • Preparation of genomic DNA for microarray-based comparative genome hybridization.
    Subcell Biochem, Vol. 40 (2006), pp. 363-371.
    by R Kimmel, A Icreverzi, P Neiman
    posted to cnv chicken by sleepingcell to the group Bioinformatics on 2007-07-13 18:28:59 as read
  • Using expression arrays for copy number detection: an example from E. Coli
    BMC Bioinformatics, Vol. 8 (14 June 2007), 203.
    by Dmitriy Skvortsov, Diana Abdueva, Michael E Stitzer, Steven E Finkel, Simon Tavare
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-06-18 09:43:26 as ** along with 3 people and 1 group ealloza bioguru2000 shigepong BioinfoCIPF
  • MLPA as a screening method of aneuploidy and unbalanced chromosomal rearrangements in spontaneous miscarriages.
    Prenat Diagn (4 June 2007)
    by Dan Diego-Alvarez, Marta Rodriguez R de Alba, Rocio Cardero-Merlo, Joaquin Diaz-Recasens, Carmen Ayuso, Carmen Ramos, Isabel Lorda-Sanchez
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-06-05 17:54:19 as ****
  • Efficient high-resolution deletion discovery in Caenorhabditis elegans by array comparative genomic hybridization.
    Genome Res, Vol. 17, No. 3. (March 2007), pp. 337-347.
    by JS Maydan, S Flibotte, ML Edgley, J Lau, RR Selzer, TA Richmond, NJ Pofahl, JH Thomas, DG Moerman
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-05-05 17:54:08 as ** along with 2 people and 1 group tharris tardigrade C. elegans / WormBase
  • Spatial normalization of array-CGH data.
    BMC Bioinformatics, Vol. 7 (2006)
    by P Neuvial, P Hupé, I Brito, S Liva, E Manié, C Brennetot, F Radvanyi, A Aurias, E Barillot
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-05-05 17:08:25 as read along with 2 people pcahan1 Garamonfok
  • Genomic variation: Copy number variation doesn't copy SNPs
    Nature Reviews Genetics, Vol. 8, No. 4. (06 March 2007), pp. 247-247.
    by Patrick Goymer
    posted to snp cnv by sleepingcell to the group Bioinformatics on 2007-05-04 17:01:14 as ***
  • Human Genome Variation 2006: emerging views on structural variation and large-scale SNP analysis
    Nat Genet, Vol. 39, No. 2. (February 2007), pp. 153-155.
    by Goncalo Abecasis, Paul K Tam, Carlos D Bustamante, Elaine A Ostrander, Stephen W Scherer, Stephen J Chanock, Pui-Yan Kwok, Anthony J Brookes
    posted to snp cnv by sleepingcell to the group Bioinformatics on 2007-05-04 17:00:31 as *** along with 2 people and 2 groups balajis dchughes G4ID Genetics-of-Gambling
  • Copy number variation map
    Nature Reviews Genetics, Vol. 8, No. 1. (28 November 2006), pp. 2-2.
    by Magdalena Skipper
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-05-04 16:49:47 as read
  • Continuous-index hidden Markov modelling of array CGH copy number data.
    Bioinformatics (19 February 2007)
    by Susann Stjernqvist, Tobias Rydén, Martin Sköld, Johan Staaf
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-30 15:10:11 as **** along with 1 person shigepong
  • Assessing the need for sequence-based normalization in tiling microarray experiments.
    Bioinformatics (25 March 2007)
    by Thomas E E Royce, Joel S S Rozowsky, Mark B B Gerstein
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-30 15:10:01 as **** along with 5 people jfr mmarchin nicholso bertelsen GeeSharpMinor
  • Gene-resolution analysis of DNA copy number variation using oligonucleotide expression microarrays
    BMC Genomics, Vol. 8, No. 1. (2007)
    by Herbert Auer, David Newsom, Norma Nowak, Kirk Mchugh, Sunita Singh, Chack Y Yu, Yan Yang, Gail Wenger, Julie G Foster, Karl Kornacker
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-30 15:09:27 as ****
  • A faster circular binary segmentation algorithm for the analysis of array CGH data.
    Bioinformatics (18 January 2007)
    by E S S Venkatraman, A B B Olshen
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-25 14:53:47 as **** along with 4 people daed rdiaz shigepong ellakat
  • Comparative analysis of algorithms for identifying amplifications and deletions in array CGH data.
    Bioinformatics (4 August 2005)
    by Weil R R Lai, Mark D D Johnson, Raju Kucherlapati, Peter J J Park
    posted to cnv 0-useful by sleepingcell to the group Bioinformatics on 2007-04-20 08:24:24 as read along with 6 people pcahan1 gpalidwor rdiaz ma_ko OscarRueda jackjackjjj
  • A comparison study: applying segmentation to array CGH data for downstream analyses.
    Bioinformatics (14 September 2005)
    by Hanni Willenbrock, Jane Fridlyand
    posted to cnv 0-useful by sleepingcell to the group Bioinformatics on 2007-04-20 08:24:09 as read along with 4 people pcahan1 archroad rdiaz OscarRueda
  • Temperature Sex Reversal Implies Sex Gene Dosage in a Reptile
    Science, Vol. 316, No. 5823. (20 April 2007), 411.
    by Alexander E Quinn, Arthur Georges, Stephen D Sarre, Fiorenzo Guarino, Tariq Ezaz, Jennifer A Graves
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 22:26:36 as **
  • A versatile statistical analysis algorithm to detect genome copy number variation.
    Proc Natl Acad Sci U S A, Vol. 101, No. 46. (16 November 2004), pp. 16292-16297.
    by RS Daruwala, A Rudra, H Ostrer, R Lucito, M Wigler, B Mishra
    posted to cnv 0-useful by sleepingcell to the group Bioinformatics on 2007-04-19 19:16:04 as read along with 3 people rdiaz OscarRueda bioguru2000
  • Comparative genomic hybridization using oligonucleotide microarrays and total genomic DNA.
    Proc Natl Acad Sci U S A, Vol. 101, No. 51. (21 December 2004), pp. 17765-17770.
    by MT Barrett, A Scheffer, A Ben-Dor, N Sampas, D Lipson, R Kincaid, P Tsang, B Curry, K Baird, PS Meltzer, Z Yakhini, L Bruhn, S Laderman
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 19:15:52 as ****
  • Frequency of new copy number variation in humans
    Nature Genetics, Vol. 37, No. 4., pp. 333-334.
    by Gert-Jan Bv van Ommen
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 19:15:25 as **
  • Segmental duplications and copy-number variation in the human genome.
    Am J Hum Genet, Vol. 77, No. 1. (July 2005), pp. 78-88.
    by AJ Sharp, DP Locke, SD McGrath, Z Cheng, JA Bailey, RU Vallente, LM Pertz, RA Clark, S Schwartz, R Segraves, VV Oseroff, DG Albertson, D Pinkel, EE Eichler
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 19:15:14 as ** along with 5 people and 3 groups daed pcahan1 balicea dchughes giovanni G4ID GeschwindLab Genetics-of-Gambling
  • Array comparative genomic hybridization and its applications in cancer.
    Nat Genet, Vol. 37 Suppl (June 2005)
    by D Pinkel, DG Albertson
    posted to cnv 0-useful by sleepingcell to the group Bioinformatics on 2007-04-19 19:15:03 as read along with 7 people and 2 groups textoris rfrousse pcahan1 archroad rdiaz tvdbulck frohike Institut_Hemato_Oncologie_Pediatrique Neuroblastome_SFCE
  • Copy-number polymorphisms: mining the tip of an iceberg.
    Trends Genet, Vol. 21, No. 6. (June 2005), pp. 315-317.
    by PG Buckley, KK Mantripragada, A Piotrowski, T Diaz de Ståhl, JP Dumanski
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 19:14:53 as ** along with 2 people pcahan1 bioguru2000
  • Comparative genomic hybridization.
    Annu Rev Genomics Hum Genet, Vol. 6 (2005), pp. 331-354.
    by D Pinkel, DG Albertson
    posted to cnv 0-useful by sleepingcell to the group Bioinformatics on 2007-04-19 19:14:44 as read along with 1 person uz_labu_laimi
  • Recent advances in array comparative genomic hybridization technologies and their applications in human genetics
    European Journal of Human Genetics, Vol. aop, No. current.
    by William W Lockwood, Raj Chari, Bryan Chi, Wan L Lam,
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 19:14:31 as **** along with 1 person rdiaz
  • Screening of copy number polymorphisms in human beta-defensin genes using modified real-time quantitative PCR.
    J Immunol Methods, Vol. 308, No. 1-2. (20 January 2006), pp. 231-240.
    by Q Chen, M Book, X Fang, A Hoeft, F Stuber
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 19:14:08 as ***
  • Structural variation in the human genome
    Nature Reviews Genetics, Vol. 7, No. 2., pp. 85-97.
    by Lars Feuk, Andrew R Carson, Stephen W Scherer
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 19:13:53 as ** along with 18 people and 10 groups Zephyrus dlobo jandot cgreal balajis bala balicea dchughes tabu darcyduke adepace AaronDarling rdiaz massivemayhem cat_worth jmrivort ccr Lip GEB CGREL structural_bioinformatics EisenLab SFX-Verde-team-MITLibraries G4ID G-quadruplex Supramolecular DictyosteliumGroup Genetics-of-Gambling
  • Strategies for the detection of copy number and other structural variants in the human genome.
    Hum Genomics, Vol. 2, No. 6. (June 2006), pp. 403-414.
    by AR Carson, L Feuk, M Mohammed, SW Scherer
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 19:06:35 as **** along with 2 people and 1 group indigoviolet rdiaz EisenLab
  • Integrating copy number polymorphisms into array CGH analysis using a robust HMM.
    Bioinformatics, Vol. 22, No. 14. (15 July 2006)
    by SP Shah, X Xuan, RJ Deleeuw, M Khojasteh, WL Lam, R Ng, KP Murphy
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 19:06:18 as **** along with 5 people pcahan1 rdiaz OscarRueda jackjackjjj frohike
  • ChromoScan: a scan statistic application for identifying chromosomal regions in genomic studies.
    Bioinformatics, Vol. 22, No. 23. (1 December 2006), pp. 2945-2947.
    by YV Sun, DM Jacobsen, SL Kardia
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 19:06:00 as ****
  • A hierarchical clustering method for estimating copy number variation.
    Biostatistics (23 October 2006)
    by Baifang Xing, Celia M T M Greenwood, Shelley B B Bull
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 19:05:48 as **** along with 2 people jfr shigepong
  • Structural divergence between the human and chimpanzee genomes
    Human Genetics, Vol. 120, No. 6. (January 2007), pp. 759-778.
    by Kehrer-Sawatzki, Hildegard, Cooper, David
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 19:05:27 as ** along with 1 person hpaces
  • Analysis of copy number variation in the normal human population within a region containing complex segmental duplications on 22q11 using high-resolution array-CGH.
    Genomics, Vol. 88, No. 2. (August 2006), pp. 152-162.
    by C de Bustos, T Díaz de Ståhl, A Piotrowski, KK Mantripragada, PG Buckley, E Darai, CM Hansson, G Grigelionis, U Menzel, JP Dumanski
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 19:04:52 as ***
  • WebaCGH: an interactive online tool for the analysis and display of array comparative genomic hybridisation data.
    Appl Bioinformatics, Vol. 5, No. 2. (2006), pp. 125-130.
    by C Frankenberger, X Wu, J Harmon, D Church, LM Gangi, DJ Munroe, U Urzúa
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 19:04:32 as read along with 1 person rdiaz
  • Mapping tumor-suppressor genes with multipoint statistics from copy-number-variation data.
    Am J Hum Genet, Vol. 79, No. 1. (July 2006), pp. 13-22.
    by I Ionita, RS Daruwala, B Mishra
    posted to cnv by sleepingcell to the group Bioinformatics on 2007-04-19 19:04:21 as **** along with 2 people rdiaz OscarRueda
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