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timflutre's Yang [7 articles]

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  • notes Maximum-likelihood estimation of phylogeny from DNA sequences when substitution rates differ over sites.
    Mol Biol Evol, Vol. 10, No. 6. (November 1993), pp. 1396-1401.
    by Z Yang
    posted to molec_evo phylogeny stats by timflutre on 2008-06-12 19:08:28 as ** along with 1 person bpb
  • notes Estimating the pattern of nucleotide substitution
    Journal of Molecular Evolution, Vol. 39, No. 1. (1 July 1994), pp. 105-111.
    by Ziheng Yang
    posted to molec_evo phylogeny by timflutre on 2008-06-12 18:44:17 as ** along with 1 person CharlesM
  • Covariation in frequencies of substitution, deletion, transposition, and recombination during eutherian evolution.
    Genome Res, Vol. 13, No. 1. (January 2003), pp. 13-26.
    by RC Hardison, KM Roskin, S Yang, M Diekhans, WJ Kent, R Weber, L Elnitski, J Li, M O'Connor, D Kolbe, S Schwartz, TS Furey, S Whelan, N Goldman, A Smit, W Miller, F Chiaromonte, D Haussler
    posted to evolution genomics humans recombination te by timflutre on 2008-05-16 08:37:09 as *** along with 1 person gjuggler
  • ReAS: Recovery of Ancestral Sequences for Transposable Elements from the Unassembled Reads of a Whole Genome Shotgun
    PLoS Computational Biology, Vol. 1, No. 4. (1 September 2005), e43.
    by Ruiqiang Li, Jia Ye, Songgang Li, Jing Wang, Yujun Han, Chen Ye, Jian Wang, Huanming Yang, Jun Yu, Gane K Wong, Jun Wang
    posted to bioinformatics rpt by timflutre on 2008-03-18 10:45:03 as ** along with 1 person yoanjacquemin
  • Accuracy and Power of Statistical Methods for Detecting Adaptive Evolution in Protein Coding Sequences and for Identifying Positively Selected Sites
    Genetics, Vol. 168, No. 2. (1 October 2004), pp. 1041-1051.
    by Wendy S Wong, Ziheng Yang, Nick Goldman, Rasmus Nielsen
    posted to molec_evo by timflutre on 2007-09-10 14:54:20 as ** along with 4 people BioNica Natasha gjuggler CharlesM
  • Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models.
    Molecular Biology and Evolution, Vol. 17, No. 1. (January 2000), pp. 32-43.
    by Z Yang, R Nielsen
    posted to molec_evo by timflutre on 2007-09-10 14:51:35 as ** along with 8 people and 1 group bjorns fernan hdopazo BioNica Garamonfok ankur_iitg RamuAnandakrishnan Ema BioinfoCIPF
  • A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae
    Nature, Vol. 403, No. 6770. (10 February 2000), pp. 623-627.
    by Peter Uetz, Loic Giot, Gerard Cagney, Traci A Mansfield, Richard S Judson, James R Knight, Daniel Lockshon, Vaibhav Narayan, Maithreyan Srinivasan, Pascale Pochart, Alia Qureshi-Emili, Ying Li, Brian Godwin, Diana Conover, Theodore Kalbfleisch, Govindan Vijayadamodar, Meijia Yang, Mark Johnston, Stanley Fields, Jonathan M Rothberg
    posted to networks by timflutre on 2007-02-25 13:16:46 as ** along with 14 people and 1 group dragonrez bicko shivaram lfriedl chad_davis j3xucite dyermd ruvido gcalda grahamc laughcry hplatero csanford carlk kdl
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