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selrac's library [28 articles]

最近录入 selrac's 文献库.
  • Dissecting protein-protein recognition sites
    Proteins, Vol. 47, No. 3. (15 May 2002), pp. 334-343.
    by Pinak Chakrabarti, Joel Janin
    posted to no-tag by selrac on 2007-09-11 14:57:46 as read along with 1 person and 2 groups barry structural_bioinformatics Bioinformatics
  • Combination of scoring functions improves discrimination in protein-protein docking.
    Proteins, Vol. 53, No. 4. (1 December 2003), pp. 840-854.
    by J Murphy, DW Gatchell, JC Prasad, S Vajda
    posted to no-tag by selrac on 2007-09-11 14:56:01 as read along with 1 person bicko
  • Development of unified statistical potentials describing protein-protein interactions.
    Biophys J, Vol. 84, No. 3. (March 2003), pp. 1895-1901.
    by H Lu, L Lu, J Skolnick
    posted to no-tag by selrac on 2007-09-11 14:55:35 as read along with 5 people wilbur iris_2001 mdimmic chad_davis cjeans
  • CAPRI: a Critical Assessment of PRedicted Interactions.
    Proteins, Vol. 52, No. 1. (1 July 2003), pp. 2-9.
    by J Janin, K Henrick, J Moult, LT Eyck, MJ Sternberg, S Vajda, I Vakser, SJ Wodak,
    posted to no-tag by selrac on 2007-09-11 14:52:05 as read along with 2 people chad_davis ffranca
  • Improved side-chain modeling for protein-protein docking.
    Protein Sci, Vol. 14, No. 5. (May 2005), pp. 1328-1339.
    by C Wang, O Schueler-Furman, D Baker
    posted to no-tag by selrac on 2007-09-11 14:51:25 as read along with 9 people and 3 groups barry aqeel jwm bicko yongzhao blackbart bluvsh1 hmk Evangelia structural_bioinformatics Bioinformatics TSRI_MGL
  • Protein-Protein Docking Benchmark 2.0: an update.
    Proteins, Vol. 60, No. 2. (1 August 2005), pp. 214-216.
    by J Mintseris, K Wiehe, B Pierce, R Anderson, R Chen, J Janin, Z Weng
    posted to no-tag by selrac on 2007-09-11 14:48:16 as read along with 8 people boris_aguilar aqeel julianm bicko chad_davis ima bluvsh1 Iainios
  • RDOCK: refinement of rigid-body protein docking predictions.
    Proteins, Vol. 53, No. 3. (15 November 2003), pp. 693-707.
    by L Li, R Chen, Z Weng
    posted to no-tag by selrac on 2007-09-11 14:47:13 as read along with 1 person and 2 groups jwm Radiation_Damage Stressosome
  • pyDock: electrostatics and desolvation for effective scoring of rigid-body protein-protein docking.
    Proteins, Vol. 68, No. 2. (1 August 2007), pp. 503-515.
    by T Man-Kuang Cheng, TL Blundell, J Fernandez-Recio
    posted to no-tag by selrac on 2007-09-11 14:44:39 as read along with 1 person bicko
  • Use of pair potentials across protein interfaces in screening predicted docked complexes.
    Proteins, Vol. 35, No. 3. (15 May 1999), pp. 364-373.
    by G Moont, HA Gabb, MJ Sternberg
    posted to no-tag by selrac on 2007-09-11 14:43:56 as read along with 3 people and 2 groups jwm bicko chaleil Radiation_Damage Stressosome
  • Soft protein-protein docking in internal coordinates.
    Protein Sci, Vol. 11, No. 2. (February 2002), pp. 280-291.
    by J Fernández-Recio, M Totrov, R Abagyan
    posted to no-tag by selrac on 2007-09-11 14:43:07 as read along with 5 people and 2 groups barry bicko bluvsh1 cjeans wilbur structural_bioinformatics Bioinformatics
  • Protein-Protein Docking with Simultaneous Optimization of Rigid-body Displacement and Side-chain Conformations
    Journal of Molecular Biology, Vol. 331, No. 1. (1 August 2003), pp. 281-299.
    by Jeffrey J Gray, Stewart Moughon, Chu Wang, Ora Schueler-Furman, Brian Kuhlman, Carol A Rohl, David Baker
    posted to no-tag by selrac on 2007-09-11 14:42:35 as read along with 4 people timg xdeupi ima bluvsh1
  • PIPER: an FFT-based protein docking program with pairwise potentials.
    Proteins, Vol. 65, No. 2. (1 November 2006), pp. 392-406.
    by D Kozakov, R Brenke, SR Comeau, S Vajda
    posted to no-tag by selrac on 2007-09-11 14:41:47 as read along with 1 person chad_davis
  • ZDOCK: an initial-stage protein-docking algorithm.
    Proteins, Vol. 52, No. 1. (1 July 2003), pp. 80-87.
    by R Chen, L Li, Z Weng
    posted to no-tag by selrac on 2007-09-11 14:40:58 as read along with 4 people and 2 groups jwm bicko ffranca gruppo Radiation_Damage Stressosome
  • BiGGER: a new (soft) docking algorithm for predicting protein interactions.
    Proteins, Vol. 39, No. 4. (1 June 2000), pp. 372-384.
    by PN Palma, L Krippahl, JE Wampler, JJ Moura
    posted to no-tag by selrac on 2007-09-11 14:40:14 as read along with 1 person bicko
  • Modelling protein docking using shape complementarity, electrostatics and biochemical information
    Journal of Molecular Biology, Vol. 272, No. 1. (12 September 1997), pp. 106-120.
    by Henry A Gabb, Richard M Jackson, Michael J Sternberg
    posted to no-tag by selrac on 2007-09-11 14:39:19 as read along with 7 people and 3 groups jwm bicko yongzhao ima ffranca cjeans kintoki Radiation_Damage Stressosome TSRI_MGL
  • Molecular surface recognition: determination of geometric fit between proteins and their ligands by correlation techniques
    Proceedings Of The National Academy Of Sciences Of The United States Of America, Vol. 89, No. 6. (15 March 1992), pp. 2195-2199.
    by E Katchalski-Katzir, Shariv, M Eisenstein, AA Friesem, C Aflalo, IA Vakser
    posted to no-tag by selrac on 2007-09-11 14:37:40 as read along with 1 person bicko
  • Protein-protein docking: is the glass half-full or half-empty?
    Trends Biotechnol, Vol. 22, No. 3. (March 2004), pp. 110-116.
    by S Vajda, CJ Camacho
    posted to no-tag by selrac on 2007-09-11 14:36:56 as read along with 2 people and 1 group bicko anita structure-bii
  • Prediction of protein-protein interactions by docking methods.
    Curr Opin Struct Biol, Vol. 12, No. 1. (February 2002), pp. 28-35.
    by GR Smith, MJ Sternberg
    posted to no-tag by selrac on 2007-09-11 14:36:05 as read along with 2 people LeightonP bicko
  • Protein interaction networks from yeast to human.
    Curr Opin Struct Biol, Vol. 14, No. 3. (June 2004), pp. 292-299.
    by P Bork, LJ Jensen, C von Mering, AK Ramani, I Lee, EM Marcotte
    posted to no-tag by selrac on 2007-09-11 14:34:05 as read along with 7 people kuhn koller grahamc cjeans lpfernandes Evangelia larsjuhljensen
  • Prediction of protein-protein interactions by combining structure and sequence conservation in protein interfaces
    Bioinformatics, Vol. 21, No. 12. (15 June 2005), pp. 2850-2855.
    by Selim S Aytuna, Attila Gursoy, Ozlem Keskin
    posted to no-tag by selrac on 2007-09-11 14:32:56 as read along with 2 people higueruelo cjeans
  • Protein interaction maps for complete genomes based on gene fusion events.
    Nature, Vol. 402, No. 6757. (4 November 1999), pp. 86-90.
    by AJ Enright, I Iliopoulos, NC Kyrpides, CA Ouzounis
    posted to no-tag by selrac on 2007-09-11 11:32:52 as read along with 3 people carlk balajis ruvido
  • Similarity of phylogenetic trees as indicator of protein-protein interaction.
    Protein Eng, Vol. 14, No. 9. (September 2001), pp. 609-614.
    by F Pazos, A Valencia
    posted to no-tag by selrac on 2007-09-11 11:32:00 as read along with 4 people ca3295 balajis IbnBio tale
  • Computational methods for the prediction of protein interactions
    Current Opinion in Structural Biology, Vol. 12, No. 3. (1 June 2002), pp. 368-373.
    by Alfonso Valencia, Florencio Pazos
    posted to no-tag by selrac on 2007-09-11 11:31:30 as read along with 2 people IbnBio ruvido
  • Protein--protein interaction maps: a lead towards cellular functions.
    Trends Genet, Vol. 17, No. 6. (June 2001), pp. 346-352.
    by P Legrain, J Wojcik, JM Gauthier
    posted to no-tag by selrac on 2007-09-11 11:30:49 as read along with 1 person fisherp
  • Global Analysis of Protein Activities Using Proteome Chips
    Science, Vol. 293, No. 5537. (14 September 2001), pp. 2101-2105.
    by Heng Zhu, Metin Bilgin, Rhonda Bangham, David Hall, Antonio Casamayor, Paul Bertone, Ning Lan, Ronald Jansen, Scott Bidlingmaier, Thomas Houfek, Tom Mitchell, Perry Miller, Ralph A Dean, Mark Gerstein, Michael Snyder
    posted to no-tag by selrac on 2007-09-11 11:30:21 as read along with 1 person kaarsinogen
  • A novel genetic system to detect protein-protein interactions.
    Nature, Vol. 340, No. 6230. (20 July 1989), pp. 245-246.
    by S Fields, O Song
    posted to no-tag by selrac on 2007-09-11 11:29:41 as read along with 7 people carlk caldavis shivaram helenc gurkanbebek Dualsystems grahamc
  • The Impact of Structural Genomics: Expectations and Outcomes
    Science, Vol. 311, No. 5759. (20 January 2006), pp. 347-351.
    by John-Marc Chandonia, Steven E Brenner
    posted to no-tag by selrac on 2007-09-11 11:28:44 as read along with 9 people and 2 groups tjimenez bicko balajis marcius tny penka anwazo dgront insectopalo BioinfoCIPF SGU-CIPF
  • The Protein Data Bank.
    Nucleic Acids Res, Vol. 28, No. 1. (1 January 2000), pp. 235-242.
    by HM Berman, J Westbrook, Z Feng, G Gilliland, TN Bhat, H Weissig, IN Shindyalov, PE Bourne
    posted to no-tag by selrac on 2007-09-11 11:27:30 as read along with 22 people and 4 groups sebk higueruelo boris_aguilar nigham lillekatt thaliana dimka kuhn jwm vavi bicko itmeson dgront caporaso condon leelarcombe aengisch debatebob massivemayhem gisle girschick tji Radiation_Damage Stressosome biomedical-nlp beta
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