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sebastien_vigneau's ctcf [64 articles]

当前文献位于 sebastien_vigneau's 文献库 标签分类为 ctcf. You can also see everyone's ctcf.
  • CTCF binding and higher order chromatin structure of the H19 locus are maintained in mitotic chromatin
    The EMBO Journal, Vol. aop, No. current. (18 August 2005)
    by Les J Burke, Ru Zhang, Marek Bartkuhn, Vijay K Tiwari, Gholamreza Tavoosidana, Sreenivasulu Kurukuti, Christine Weth, Joerg Leers, Niels Galjart, Rolf Ohlsson, Rainer Renkawitz
    posted to mitosis h19 ctcf by sebastien_vigneau on 2008-08-01 18:09:35 as read
  • Cohesin and CTCF: cooperating to control chromosome conformation?
    BioEssays : news and reviews in molecular, cellular and developmental biology, Vol. 30, No. 8. (August 2008), pp. 715-718.
    by M Gause, CA Schaaf, D Dorsett
    posted to review ctcf cohesin by sebastien_vigneau on 2008-07-19 15:00:14 as read
  • CTCF physically links cohesin to chromatin.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 105, No. 24. (17 June 2008), pp. 8309-8314.
    by ED Rubio, DJ Reiss, PL Welcsh, CM Disteche, GN Filippova, NS Baliga, R Aebersold, JA Ranish, A Krumm
    posted to ctcf cohesin centromere by sebastien_vigneau on 2008-07-18 18:26:36 as read along with 1 person inesdesantiago
  • Maternal depletion of CTCF reveals multiple functions during oocyte and preimplantation embryo development.
    Development (Cambridge, England) (9 July 2008)
    by Le-Ben B Wan, Hua Pan, Sridhar Hannenhalli, Yong Cheng, Jun Ma, Andrew Fedoriw, Victor Lobanenkov, Keith E E Latham, Richard M M Schultz, Marisa S S Bartolomei
    posted to zygote oocyte imprinting ctcf by sebastien_vigneau on 2008-07-14 13:13:51 as read
  • Genomic imprinting: CTCF protects the boundaries.
    Current biology : CB, Vol. 14, No. 7. (6 April 2004)
    by A Lewis, A Murrell
    posted to imprinting icr h19 ctcf by sebastien_vigneau on 2008-06-28 00:48:45 as read
  • The H19 gene: regulation and function of a non-coding RNA.
    Cytogenetic and genome research, Vol. 113, No. 1-4. (2006), pp. 188-193.
    by A Gabory, MA Ripoche, T Yoshimizu, L Dandolo
    posted to review imprinting igf2 icr h19 dmr dmd ctcf by sebastien_vigneau on 2008-06-28 00:38:48 as read
  • Epigenetic mark sequence of the H19 gene in human sperm
    Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression, Vol. 1518, No. 1-2. (19 March 2001), pp. 137-144.
    by Toshio Hamatani, Hiroyuki Sasaki, Ko Ishihara, Naoko Hida, Tetsuo Maruyama, Yasunori Yoshimura, Jun-Ichi Hata, Akihiro Umezawa
    posted to sperm imprinting icr human h19 dmr dmd ctcf by sebastien_vigneau on 2008-06-28 00:28:26 as read
  • Large scale mapping of methylcytosines in CTCF-binding sites in the human H19 promoter and aberrant hypomethylation in human bladder cancer
    Hum. Mol. Genet., Vol. 10, No. 23. (1 November 2001), pp. 2619-2626.
    by Daiya Takai, Felicidad A Gonzales, Yvonne C Tsai, Mathew J Thayer, Peter A Jones
    posted to imprinting icr human h19 dmr dmd ctcf by sebastien_vigneau on 2008-06-28 00:21:20 as read
  • Genetics and Epigenetics of the Multifunctional Protein CTCF.
    Curr Top Dev Biol, Vol. 80 (2007), pp. 337-360.
    by GN Filippova
    posted to review epigenetics ctcf by sebastien_vigneau on 2008-05-30 19:58:37 as read along with 2 people jyuh idonaldson
  • The DXPas34 repeat regulates random and imprinted X inactivation.
    Developmental cell, Vol. 12, No. 1. (January 2007), pp. 57-71.
    by DE Cohen, LS Davidow, JA Erwin, N Xu, D Warshawsky, JT Lee
    posted to x-chromosome repeat minisatellite inactivation dxpas34 ctcf by sebastien_vigneau on 2008-05-21 15:30:39 as read
  • Identification of a tyrosine-phosphorylated CCCTC-binding nuclear factor in capacitated mouse spermatozoa
    PROTEOMICS, Vol. 6, No. 17. (2006), pp. 4800-4807.
    by Jyh-Bing Tang, Yee-Hsiung Chen
    posted to ccctc ctcf sperm testis by sebastien_vigneau on 2008-04-16 21:44:21 as read
  • The nucleotides responsible for the direct physical contact between the chromatin insulator protein CTCF and the H19 imprinting control region manifest parent of origin-specific long-distance insulation and methylation-free domains
    Genes Dev., Vol. 17, No. 5. (1 March 2003), pp. 586-590.
    by Vinod Pant, Piero Mariano, Chandrasekhar Kanduri, Anita Mattsson, Victor Lobanenkov, Rainer Heuchel, Rolf Ohlsson
    posted to boris ctcf h19 nuclear-localization pairing by sebastien_vigneau on 2008-04-16 20:48:02 as read along with 1 person olympos
  • Expression of the CTCF-paralogous cancer-testis gene, brother of the regulator of imprinted sites (BORIS), is regulated by three alternative promoters modulated by CpG methylation and by CTCF and p53 transcription factors.
    Nucleic acids research, Vol. 35, No. 21. (2007), pp. 7372-7388.
    by S Renaud, EM Pugacheva, MD Delgado, R Braunschweig, Z Abdullaev, D Loukinov, J Benhattar, V Lobanenkov
    posted to boris cpg ctcf methylation p53 by sebastien_vigneau on 2008-04-16 20:42:10 as read
  • BORIS, a novel male germ-line-specific protein associated with epigenetic reprogramming events, shares the same 11-zinc-finger domain with CTCF, the insulator protein involved in reading imprinting marks in the soma.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 99, No. 10. (14 May 2002), pp. 6806-6811.
    by DI Loukinov, E Pugacheva, S Vatolin, SD Pack, H Moon, I Chernukhin, P Mannan, E Larsson, C Kanduri, AA Vostrov, H Cui, EL Niemitz, JE Rasko, FM Docquier, M Kistler, JJ Breen, Z Zhuang, WW Quitschke, R Renkawitz, EM Klenova, AP Feinberg, R Ohlsson, HC Morse, VV Lobanenkov
    posted to boris ctcf imprinting by sebastien_vigneau on 2008-04-16 20:14:38 as read
  • Cloning and characterization of zebrafish CTCF: Developmental expression patterns, regulation of the promoter region, and evolutionary aspects of gene organization.
    Gene, Vol. 375 (21 June 2006), pp. 26-36.
    by EM Pugacheva, YW Kwon, NA Hukriede, Pack, PT Flanagan, JC Ahn, JA Park, KS Choi, KW Kim, D Loukinov, IB Dawid, VV Lobanenkov
    posted to ctcf evolution zebrafish by sebastien_vigneau on 2008-04-16 20:12:31 as read
  • Molecular cloning and expression of the chromatin insulator protein CTCF in Xenopus laevis.
    Mech Dev., Vol. 113, No. 1. (April 2002), pp. 95-98.
    by LJ Burke, T Hollemann, T Pieler, R Renkawitz
    posted to ctcf evolution xenopus by sebastien_vigneau on 2008-04-16 20:06:21 as read
  • Characterization of the chicken CTCF genomic locus, and initial study of the cell cycle-regulated promoter of the gene.
    The Journal of biological chemistry, Vol. 273, No. 41. (9 October 1998), pp. 26571-26579.
    by EM Klenova, S Fagerlie, GN Filippova, L Kretzner, GH Goodwin, G Loring, PE Neiman, VV Lobanenkov
    posted to chicken ctcf by sebastien_vigneau on 2008-04-16 19:59:06 as read
  • Statistical significance of cis-regulatory modules
    BMC Bioinformatics, Vol. 8, No. 1. (2007)
    by Dustin Schones, Andrew Smith, Michael Zhang
    posted to bioinformatics ctcf enhancer evolution expression genome-wide by sebastien_vigneau on 2008-04-02 22:48:48 as read along with 9 people and 1 group sconlan indigoviolet dpollard dquest shigepong SeungjoonOh GustavoLacerda nklee xili03 EisenLab
  • CTCFBSDB: a CTCF-binding site database for characterization of vertebrate genomic insulators.
    Nucleic Acids Res., Vol. 36 (January 2008)
    by L Bao, M Zhou, Y Cui
    posted to binding ctcf database genome-wide by sebastien_vigneau on 2008-03-27 14:14:49 as read
  • Cohesins localize with CTCF at the KSHV latency control region and at cellular c-myc and H19/Igf2 insulators
    The EMBO Journal, Vol. aop, No. current. (24 January 2008)
    by William Stedman, Hyojeung Kang, Shu Lin, Joseph L Kissil, Marisa S Bartolomei, Paul M Lieberman
    posted to cohesin ctcf h19 herpesvirus igf2 k14 kaposi kshv lana orf71 orf72 orf73 orf74 rad21 sarcoma smc1 vcyclin vflip vgpcr virus vmirna by sebastien_vigneau on 2008-03-21 14:52:10 as read along with 1 person clearbluespring
  • Cohesin mediates transcriptional insulation by CCCTC-binding factor
    Nature (30 January 2008)
    by Kerstin S Wendt, Keisuke Yoshida, Takehiko Itoh, Masashige Bando, Birgit Koch, Erika Schirghuber, Shuichi Tsutsumi, Genta Nagae, Ko Ishihara, Tsuyoshi Mishiro, Kazuhide Yahata, Fumio Imamoto, Hiroyuki Aburatani, Mitsuyoshi Nakao, Naoko Imamoto, Kazuhiro Maeshima, Katsuhiko Shirahige, Jan-Michael Peters
    posted to cohesin ctcf h19 igf2 by sebastien_vigneau on 2008-03-21 14:43:48 as read along with 3 people jackjackjjj rschulz clearbluespring
  • Cohesins Functionally Associate with CTCF on Mammalian Chromosome Arms.
    Cell (29 January 2008)
    by Vania Parelho, Suzana Hadjur, Mikhail Spivakov, Marion Leleu, Stephan Sauer, Heather C C Gregson, Adam Jarmuz, Claudia Canzonetta, Zoe Webster, Tatyana Nesterova, Bradley S S Cobb, Kyoko Yokomori, Niall Dillon, Luis Aragon, Amanda G G Fisher, Matthias Merkenschlager
    posted to cohesin ctcf by sebastien_vigneau on 2008-03-21 14:39:55 as read along with 2 people jackjackjjj rschulz
  • Cohesin mediates transcriptional insulation by CCCTC-binding factor
    Nature aop (30 January 2008)
    by Kerstin S Wendt, Keisuke Yoshida, Takehiko Itoh, Masashige Bando, Birgit Koch, Erika Schirghuber, Shuichi Tsutsumi, Genta Nagae, Ko Ishihara, Tsuyoshi Mishiro, Kazuhide Yahata, Fumio Imamoto, Hiroyuki Aburatani, Mitsuyoshi Nakao, Naoko Imamoto, Kazuhiro Maeshima, Katsuhiko Shirahige, Jan-Michael Peters
    posted to cohesin ctcf h19 igf2 insulator by sebastien_vigneau on 2008-01-31 11:16:28 as *****
  • Chromatin fine structure of the c-MYC insulator element/DNase I-hypersensitive site I is not preserved during mitosis.
    Proc Natl Acad Sci U S A, Vol. 104, No. 40. (2 October 2007), pp. 15741-15746.
    by J Komura, H Ikehata, T Ono
    posted to chromatin cmyc ctcf hs by sebastien_vigneau on 2008-01-17 20:35:10 as ****
  • CTCF Interacts with and Recruits the Largest Subunit of RNA Polymerase II to CTCF Target Sites Genome-Wide
    Mol. Cell. Biol., Vol. 27, No. 5. (1 March 2007), pp. 1631-1648.
    by Igor Chernukhin, Shaharum Shamsuddin, Sung Y Kang, Rosita Bergstrom, Yoo-Wook Kwon, Wenqiang Yu, Joanne Whitehead, Rituparna Mukhopadhyay, France Docquier, Dawn Farrar, Ian Morrison, Marc Vigneron, Shwu-Yuan Wu, Cheng-Ming Chiang, Dmitri Loukinov, Victor Lobanenkov, Rolf Ohlsson, Elena Klenova
    posted to chip-chip ctcf polii by sebastien_vigneau on 2008-01-17 16:51:25 as **** along with 2 people and 1 group kengg clearbluespring Plantandetc
  • We gather together: insulators and genome organization.
    Curr Opin Genet Dev (1 October 2007)
    by Julie A A Wallace, Gary Felsenfeld
    posted to ctcf h19 igf2 insulator localization nucleus by sebastien_vigneau on 2007-10-29 15:08:34 as read along with 3 people and 1 group dpollard dchughes maximilianh EisenLab
  • Drosophila CTCF Is Required for Fab-8 Enhancer Blocking Activity in S2 Cells.
    J Mol Biol, Vol. 373, No. 2. (19 October 2007), pp. 233-239.
    by D Ciavatta, S Rogers, T Magnuson
    posted to ctcf drosophila fab-8 insulator by sebastien_vigneau on 2007-10-29 15:05:26 as **
  • The Drosophila insulator proteins CTCF and CP190 link enhancer blocking to body patterning
    The EMBO Journal, Vol. aop, No. current. (06 September 2007)
    by Man Mohan, Marek Bartkuhn, Martin Herold, Angela Philippen, Nina Heinl, Imke Bardenhagen, Joerg Leers, Robert AH White, Renate Renkawitz-Pohl, Harald Saumweber, Rainer Renkawitz
    posted to cp190 development insulator ctcf drosophila by sebastien_vigneau on 2007-10-29 15:02:59 as **
  • CTCF is conserved from Drosophila to humans and confers enhancer blocking of the Fab-8 insulator
    EMBO Reports, Vol. aop, No. current. (21 January 2005)
    by Hanlim Moon, Galina Filippova, Dmitry Loukinov, Elena Pugacheva, Qi Chen, Sheryl T Smith, Adam Munhall, Britta Grewe, Marek Bartkuhn, Rudiger Arnold, Les J Burke, Renate Renkawitz-Pohl, Rolf Ohlsson, Jumin Zhou, Rainer Renkawitz, Victor Lobanenkov
    posted to ctcf drosophila evolution fab-8 insulator by sebastien_vigneau on 2007-10-29 14:45:55 as **** along with 1 person JeffR100
  • Evidence that homologous X-chromosome pairing requires transcription and Ctcf protein.
    Nat Genet (21 October 2007)
    by Na Xu, Mary E E Donohoe, Susana S S Silva, Jeannie T T Lee
    posted to ctcf dxpas34 inactivation tsix x-chromosome xite yy1 by sebastien_vigneau on 2007-10-28 10:02:51 as read along with 2 people rschulz clearbluespring
  • Dynamic association of the mammalian insulator protein CTCF with centrosomes and the midbody.
    Exp Cell Res, Vol. 294, No. 1. (10 March 2004), pp. 86-93.
    by R Zhang, LJ Burke, JE Rasko, V Lobanenkov, R Renkawitz
    posted to centrosome ctcf localization nucleolus by sebastien_vigneau on 2007-10-19 18:56:48 as read
  • Poly(ADP-ribosyl)ation regulates CTCF-dependent chromatin insulation
    Nat Genet, Vol. 36, No. 10. (October 2004), pp. 1105-1110.
    by Wenqiang Yu, Vasudeva Ginjala, Vinod Pant, Igor Chernukhin, Joanne Whitehead, France Docquier, Dawn Farrar, Gholamreza Tavoosidana, Rituparna Mukhopadhyay, Chandrasekhar Kanduri, Mitsuo Oshimura, Andrew P Feinberg, Victor Lobanenkov, Elena Klenova, Rolf Ohlsson
    posted to ctcf ribosylation by sebastien_vigneau on 2007-10-10 13:15:35 as read along with 1 person olympos
  • Identification, genome mapping, and CTCF binding of potential insulators within the FXYD5-COX7A1 locus of human Chromosome 19q13.12
    Mammalian Genome, Vol. 17, No. 10. (October 2006), pp. 1042-1049.
    by Akopov, Sergey, Ruda, Vera, Batrak, Vera, Vetchinova, Anna, Chernov, Igor, Nikolaev, Lev, Bode, Jurgen, Sverdlov, Eugene
    posted to ctcf insulator by sebastien_vigneau on 2007-10-10 13:15:03 as ****
  • The novel BORIS + CTCF gene family is uniquely involved in the epigenetics of normal biology and cancer.
    Semin Cancer Biol, Vol. 12, No. 5. (October 2002), pp. 399-414.
    by EM Klenova, HC Morse, R Ohlsson, VV Lobanenkov
    posted to boris cancer ctcf by sebastien_vigneau on 2007-09-03 22:19:05 as read
  • Epigenetic boundaries of tumour suppressor gene promoters: the CTCF connection and its role in carcinogenesis.
    J Cell Mol Med, Vol. 10, No. 3. (p 2006), pp. 554-568.
    by F Recillas-Targa, IA De La Rosa-Velázquez, E Soto-Reyes, L Benítez-Bribiesca
    posted to cancer ctcf by sebastien_vigneau on 2007-09-03 22:16:38 as read along with 1 person JeffR100
  • CTCF is a uniquely versatile transcription regulator linked to epigenetics and disease
    Trends in Genetics, Vol. 17, No. 9. (1 September 2001), pp. 520-527.
    by Rolf Ohlsson, Rainer Renkawitz, Victor Lobanenkov
    posted to ctcf disease epigenetics by sebastien_vigneau on 2007-08-07 14:21:56 as *****
  • Rasgrf1 imprinting is regulated by a CTCF-dependent methylation-sensitive enhancer blocker.
    Mol Cell Biol, Vol. 25, No. 24. (December 2005), pp. 11184-11190.
    by B Yoon, H Herman, B Hu, YJ Park, A Lindroth, A Bell, AG West, Y Chang, A Stablewski, JC Piel, DI Loukinov, VV Lobanenkov, PD Soloway
    posted to ctcf icr imprinting rasgrf1 by sebastien_vigneau on 2007-08-07 13:53:07 as *****
  • Epigenetic analysis of the Dlk1-Gtl2 imprinted domain on mouse chromosome 12: implications for imprinting control from comparison with Igf2-H19
    Human Molecular Genetics, Vol. 11, No. 1. (2002), pp. 77-86.
    by Shuji Takada, Martina Paulsen, Maxine Tevendale, Chen-En Tsai, Gavin Kelsey, Bruce M Cattanach, Anne C Ferguson-Smith
    posted to ctcf dlk1 gtl2 icr imprinting by sebastien_vigneau on 2007-08-07 13:47:27 as *****
  • Allele-specific methylation of a functional CTCF binding site upstream of MEG3 in the human imprinted domain of 14q32
    Chromosome Research, Vol. 13, No. 8. (December 2005), pp. 809-818.
    by Alberto L Rosa, Yuan-Qing Wu, Bernard Kwabi-Addo, Karen J Coveler, Reid V Sutton, Lisa G Shaffer
    posted to ctcf icr imprinting meg3 by sebastien_vigneau on 2007-08-07 13:34:51 as *****
  • A differentially methylated imprinting control region within the Kcnq1 locus harbors a methylation-sensitive chromatin insulator.
    J Biol Chem, Vol. 277, No. 20. (17 May 2002), pp. 18106-18110.
    by C Kanduri, G Fitzpatrick, R Mukhopadhyay, M Kanduri, V Lobanenkov, M Higgins, R Ohlsson
    posted to ctcf icr imprinting kcnq1 by sebastien_vigneau on 2007-08-07 13:26:04 as *****
  • Imprinting regulation of the murine Meg1/Grb10 and human GRB10 genes; roles of brain-specific promoters and mouse-specific CTCF-binding sites.
    Nucleic Acids Res, Vol. 31, No. 5. (1 March 2003), pp. 1398-1406.
    by T Hikichi, T Kohda, T Kaneko-Ishino, F Ishino
    posted to brain ctcf grb10 icr imprinting by sebastien_vigneau on 2007-08-07 13:18:01 as ***** along with 1 person rschulz
  • Mécanismes transcriptionnels et chromatiniens de la régulation de Xist par son antisens Tsix
    (25 September 2006)
    by Navarro
    posted to antisense chromatin ctcf epigenetics heterochromatin inactivation promoter transcription tsix x-chromosome xic xist yy1 by sebastien_vigneau on 2007-07-31 11:56:32 as read
  • CTCF tethers an insulator to subnuclear sites, suggesting shared insulator mechanisms across species.
    Mol Cell, Vol. 13, No. 2. (30 January 2004), pp. 291-298.
    by TM Yusufzai, H Tagami, Y Nakatani, G Felsenfeld
    posted to ctcf insulator nucleolus nucleophosmin by sebastien_vigneau on 2007-07-25 14:27:47 as read
  • Unusual compartmentalization of CTCF and other transcription factors in the course of terminal erythroid differentiation.
    Biochim Biophys Acta, Vol. 1773, No. 6. (June 2007), pp. 924-933.
    by OL Kantidze, OV Iarovaia, ES Philonenko, II Yakutenko, SV Razin
    posted to compartment ctcf erythrocyte nucleolus territory by sebastien_vigneau on 2007-07-25 09:09:59 as **
  • Systematic discovery of regulatory motifs in conserved regions of the human genome, including thousands of CTCF insulator sites
    PNAS, Vol. 104, No. 17. (24 April 2007), pp. 7145-7150.
    by Xiaohui Xie, Tarjei S Mikkelsen, Andreas Gnirke, Kerstin Lindblad-Toh, Manolis Kellis, Eric S Lander
    edited by Pnas
    posted to bioinformatics ctcf genome-wide map by sebastien_vigneau on 2007-07-24 17:45:16 as *****
  • The Binding Sites for the Chromatin Insulator Protein CTCF Map to DNA Methylation-Free Domains Genome-Wide
    Genome Res., Vol. 14, No. 8. (1 August 2004), pp. 1594-1602.
    by Rituparna Mukhopadhyay, Wenqiang Yu, Joanne Whitehead, Junwang Xu, Magda Lezcano, Svetlana Pack, Chandrasekhar Kanduri, Meena Kanduri, Vasudeva Ginjala, Alexander Vostrov, Wolfgang Quitschke, Igor Chernukhin, Elena Klenova, Victor Lobanenkov, Rolf Ohlsson
    posted to chip-chip ctcf genome-wide insulator mbd2 methylation by sebastien_vigneau on 2007-07-24 13:55:46 as read along with 2 people olympos clearbluespring
  • CTCF-dependent chromatin insulator is linked to epigenetic remodeling.
    Mol Cell, Vol. 23, No. 5. (1 September 2006), pp. 733-742.
    by K Ishihara, M Oshimura, M Nakao
    posted to brca1 chd8 c-myc ctcf h19 imprinting insulator remodelling snf2 by sebastien_vigneau on 2007-07-24 12:32:22 as read
  • CTCF regulates asynchronous replication of the imprinted H19/Igf2 domain.
    Cell Cycle, Vol. 6, No. 4. (1 February 2007), pp. 450-454.
    by R Bergström, J Whitehead, S Kurukuti, R Ohlsson
    posted to ctcf h19 igf2 replication by sebastien_vigneau on 2007-07-24 12:21:42 as read
  • Raising the curtains on interchromosomal interactions.
    Trends Genet, Vol. 22, No. 12. (December 2006), pp. 637-639.
    by C Krueger, CS Osborne
    posted to ctcf interaction network by sebastien_vigneau on 2007-07-24 12:15:18 as *****
  • Poly(ADP-ribosyl)ation and epigenetics. Is CTCF PARt of the plot?
    Cell Cycle, Vol. 4, No. 1. (January 2005), pp. 96-101.
    by E Klenova, R Ohlsson
    posted to ctcf par ribosylation by sebastien_vigneau on 2007-07-24 12:10:44 as read
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