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rschulz's epigenetics [125 articles]

当前文献位于 rschulz's 文献库 标签分类为 epigenetics. You can also see everyone's epigenetics.
  • Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning: supplementary online material
    Nature (January 2008)
    by Shawn J Cokus, Suhua Feng, Xiaoyu Zhang, Zugen Chen, Barry Merriman, Christian D Haudenschild, Sriharsa Pradhan, Stanley F Nelson, Matteo Pellegrini, Steven E Jacobsen
  • Identification of the Meg1/Grb10 imprinted gene on mouse proximal chromosome 11, a candidate for the Silver-Russell syndrome gene.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 95, No. 3. (3 February 1998), pp. 1102-1107.
    posted to epigenetics grb10 imprinting mouse by rschulz on 2008-07-30 08:46:11 as **
  • A mono-allelic bivalent chromatin domain controls tissue-specific imprinting at Grb10
    The EMBO Journal, Vol. aop, No. current. (24 July 2008)
    by Lionel A Sanz, Stormy Chamberlain, Jean-Charles Sabourin, Amandine Henckel, Terry Magnuson, Jean-Philippe Hugnot, Robert Feil, Philippe Arnaud
    posted to brain epigenetics grb10 histone imprinting mouse by rschulz on 2008-07-30 08:32:42 as **
  • Role of DNA methylation and histone H3 lysine 27 methylation in tissue-specific imprinting of mouse Grb10.
    Mol Cell Biol, Vol. 27, No. 2. (January 2007), pp. 732-742.
  • Human GRB10 is imprinted and expressed from the paternal and maternal allele in a highly tissue- and isoform-specific fashion.
    Human molecular genetics, Vol. 9, No. 11. (1 July 2000), pp. 1587-1595.
    posted to brain dna-methylation epigenetics grb10 human imprinting muscle by rschulz on 2008-07-28 10:15:21 as **
  • Conserved methylation imprints in the human and mouse GRB10 genes with divergent allelic expression suggests differential reading of the same mark.
    Human molecular genetics, Vol. 12, No. 9. (1 May 2003), pp. 1005-1019.
    by P Arnaud, D Monk, M Hitchins, E Gordon, W Dean, CV Beechey, J Peters, W Craigen, M Preece, P Stanier, GE Moore, G Kelsey
  • DNA methyltransferase loading, but not de novo methylation, is an oocyte-autonomous process stimulated by SCF signalling.
    Developmental biology (25 June 2008)
    by Diane J J Lees-Murdock, Ho-Tak T Lau, Diego H H Castrillon, Massimo De Felici, Colum P P Walsh
  • Genomic surveys by methylation-sensitive SNP analysis identify sequence-dependent allele-specific DNA methylation.
    Nature genetics (22 June 2008)
    by Kristi Kerkel, Alexandra Spadola, Eric Yuan, Jolanta Kosek, Le Jiang, Eldad Hod, Kerry Li, Vundavalli V V Murty, Nicole Schupf, Eric Vilain, Mitzi Morris, Fatemeh Haghighi, Benjamin Tycko
  • Inferring causal relationships among different histone modifications and gene expression
    Genome Res. (18 June 2008), gr.073080.107.
    by Hong Yu, Shanshan Zhu, Bing Zhou, Huiling Xue, Jing-Dong J Han
  • Maternal and zygotic Dnmt1 are necessary and sufficient for the maintenance of DNA methylation imprints during preimplantation development.
    Genes & development, Vol. 22, No. 12. (15 June 2008), pp. 1607-1616.
    by R Hirasawa, H Chiba, M Kaneda, S Tajima, E Li, R Jaenisch, H Sasaki
    posted to blastocyst dna-methylation dnmt1 epigenetics imprinting oocyte by rschulz on 2008-06-19 19:09:12 as **
  • Comparative analysis of human chromosome 7q21 and mouse proximal chromosome 6 reveals a placental-specific imprinted gene, TFPI2/Tfpi2, which requires G9a and Eed for allelic-silencing.
    Genome research (14 May 2008)
    by David Monk, Alexandre Wagschal, Philippe Arnaud, Pari Muller, Layla Parker-Katiraee, Deborah Bourchis, Stephen W W Scherer, Robert Feil, Philip Stanier, Gudrun E E Moore
    posted to dnmt3l eed epigenetics g9a imprinting placenta tfpi2 by rschulz on 2008-05-16 17:10:18 as **
  • Regulation of alternative polyadenylation by genomic imprinting.
    Genes & development, Vol. 22, No. 9. (1 May 2008), pp. 1141-1146.
    by Andrew J J Wood, Reiner Schulz, Kathryn Woodfine, Katarzyna Koltowska, Colin V V Beechey, Jo Peters, Deborah Bourc'his, Rebecca J J Oakey
  • Random monoallelic expression: making a choice.
    Trends in genetics : TIG (29 April 2008)
    by Christel Krueger, Ian M M Morison
  • Intronic CpG content and alternative splicing in human genes containing a single cassette exon.
    Epigenetics : official journal of the DNA Methylation Society, Vol. 3, No. 2. (8 April 2008)
    by Andigoni Malousi, Nicos Maglaveras, Sofia Kouidou
    posted to alternative dna-methylation epigenetics intron splicing by rschulz on 2008-04-21 09:11:24 as **
  • A novel variant of Inpp5f is imprinted in brain, and its expression is correlated with differential methylation of an internal CpG island.
    Molecular and cellular biology, Vol. 25, No. 13. (July 2005), pp. 5514-5522.
    by JD Choi, LA Underkoffler, AJ Wood, JN Collins, PT Williams, JA Golden, EF Schuster, KM Loomes, RJ Oakey
    posted to brain epigenetics imprinting inpp5f mouse by rschulz on 2008-04-04 11:06:59 as read
  • Global Analysis of Genetic, Epigenetic and Transcriptional Polymorphisms in Arabidopsis thaliana Using Whole Genome Tiling Arrays.
    PLoS Genet, Vol. 4, No. 3. (March 2008)
    by X Zhang, S Shiu, A Cal, JO Borevitz
  • SNP-specific array-based allele-specific expression analysis.
    Genome Res (27 March 2008)
    by Hans T T Bjornsson, Thomas J J Albert, Christine M M Ladd-Acosta, Roland D D Green, Michael A A Rongione, Christina M M Middle, Rafael A A Irizarry, Karl W W Broman, Andrew P P Feinberg
  • Cancer epigenomics: DNA methylomes and histone-modification maps
    Nature Reviews Genetics, Vol. 8, No. 4. (06 March 2007), pp. 286-298.
    by Manel Esteller
  • Evidence for an instructive mechanism of de novo methylation in cancer cells
    Nature Genetics, Vol. 38, No. 2. (24 January 2006), pp. 149-153.
    by Ilana Keshet, Yeshayahu Schlesinger, Shlomit Farkash, Eyal Rand, Merav Hecht, Eran Segal, Eli Pikarski, Richard A Young, Alain Niveleau, Howard Cedar, Itamar Simon
  • Mammalian DNA methyltransferases: a structural perspective.
    Structure, Vol. 16, No. 3. (March 2008), pp. 341-350.
    by X Cheng, RM Blumenthal
  • Cellular programming of plant gene imprinting.
    Cell, Vol. 132, No. 5. (7 March 2008), pp. 735-744.
    by JH Huh, MJ Bauer, TF Hsieh, RL Fischer
    posted to epigenetics evolution imprinting plant review by rschulz on 2008-03-17 08:42:51 as **
  • Genetic and epigenetic contributions to the cortical phenotype in mammals.
    Brain Res Bull, Vol. 75, No. 2-4. (18 March 2008), pp. 391-397.
    by DD Larsen, L Krubitzer
    posted to brain cortex epigenetics mouse review by rschulz on 2008-03-17 08:40:48 as **
  • Epigenetic interactions between transposons and genes: lessons from plants.
    Curr Opin Genet Dev (11 March 2008)
    by Cliff Weil, Rob Martienssen
  • RNA expression microarray analysis in mouse prospermatogonia: Identification of candidate epigenetic modifiers.
    Dev Dyn (10 March 2008)
    by Christophe Lefèvre, Jeffrey R R Mann
    posted to epigenetics expression germline microarray mouse sperm by rschulz on 2008-03-12 16:37:45 as **
  • Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning
    Nature (January 2008)
    by Shawn J Cokus, Suhua Feng, Xiaoyu Zhang, Zugen Chen, Barry Merriman, Christian D Haudenschild, Sriharsa Pradhan, Stanley F Nelson, Matteo Pellegrini, Steven E Jacobsen
  • Genome-wide maps of chromatin state in pluripotent and lineage-committed cells
    Nature (01 July 2007)
    by Tarjei S Mikkelsen, Manching Ku, David B Jaffe, Biju Issac, Erez Lieberman, Georgia Giannoukos, Pablo Alvarez, William Brockman, Tae-Kyung Kim, Richard P Koche, William Lee, Eric Mendenhall, Aisling O’donovan, Aviva Presser, Carsten Russ, Xiaohui Xie, Alexander Meissner, Marius Wernig, Rudolf Jaenisch, Chad Nusbaum, Eric S Lander, Bradley E Bernstein
  • Crucial role of antisense transcription across the Xist promoter in Tsix-mediated Xist chromatin modification
    Development, Vol. 135, No. 2. (15 January 2008), pp. 227-235.
    by Tatsuya Ohhata, Yuko Hoki, Hiroyuki Sasaki, Takashi Sado
  • Evidence that homologous X-chromosome pairing requires transcription and Ctcf protein.
    Nat Genet (21 October 2007)
    by Na Xu, Mary E E Donohoe, Susana S S Silva, Jeannie T T Lee
  • Identification of novel imprinted genes in a genome-wide screen for maternal methylation.
    Genome Res, Vol. 13, No. 4. (April 2003), pp. 558-569.
    by RJ Smith, W Dean, G Konfortova, G Kelsey
    posted to epigenetics herc3 imprinting nap1l5 nibp peg13 by rschulz on 2008-02-25 12:16:43 as **
  • The mouse Murr1 gene is imprinted in the adult brain, presumably due to transcriptional interference by the antisense-oriented U2af1-rs1 gene.
    Mol Cell Biol, Vol. 24, No. 1. (January 2004), pp. 270-279.
    by Y Wang, K Joh, S Masuko, H Yatsuki, H Soejima, A Nabetani, CV Beechey, S Okinami, T Mukai
  • Transposable elements and the epigenetic regulation of the genome
    Nature Reviews Genetics, Vol. 8, No. 4., pp. 272-285.
    by Keith R Slotkin, Robert Martienssen
  • Superovulation alters the expression of imprinted genes in the midgestation mouse placenta.
    Hum Mol Genet (20 February 2008)
    by Amanda L L Fortier, Flavia L L Lopes, Nicole Darricarrère, Josée Martel, Jacquetta M M Trasler
    posted to epigenetics imprinting mouse placenta superovulation by rschulz on 2008-02-25 08:32:30 as **
  • Genetic and Functional Analysis of neuronatin in Mice with Maternal or Paternal Duplication of Distal Chr 2
    Developmental Biology, Vol. 190, No. 1. (1 October 1997), pp. 66-77.
    by Nobuaki Kikyo, Christine M Williamson, Rosalind M John, Sheila C Barton, Colin V Beechey, Simon T Ball, Bruce M Cattanach, Azim M Surani, Josephine Peters
    posted to chr2 dna-methylation epigenetics expression imprinting mouse nnat upd by rschulz on 2008-02-22 11:00:57 as read
  • Profound phenotypic variation among mice deficient in the maintenance of genomic imprints.
    Hum Reprod (13 February 2008)
    by Marc Toppings, Carlos Castro, Parker H H Mills, Bonnie Reinhart, Gerald Schatten, Eric T T Ahrens, J Richard R Chaillet, Jacquetta M M Trasler
  • Non-coding RNAs in imprinted gene clusters.
    Biol Cell, Vol. 100, No. 3. (March 2008), pp. 149-166.
    by H Royo, J Cavaillé
  • Heritable gene repression through the action of a directed DNA methyltransferase at a chromosomal locus.
    J Biol Chem (13 February 2008)
    by Alexander E E Smith, Paul J J Hurd, Andrew J J Bannister, Tony Kouzarides, Kevin G G Ford
  • Polymorphisms in the H19 Gene and the Risk of Bladder Cancer.
    Eur Urol (4 February 2008)
    by Gerald W W Verhaegh, Linda Verkleij, Sita H H M H Vermeulen, Martin den Heijer, J Alfred A Witjes, Lambertus A A Kiemeney
    posted to bladder cancer epigenetics h19 human imprinting by rschulz on 2008-02-13 11:53:12 as **
  • RNA and transcriptional modulation of gene expression.
    Cell Cycle, Vol. 7, No. 5. (29 December 2007)
    by Peter Hawkins, Kevin V Morris
    posted to dna-methylation epigenetics histone interference promoter rna by rschulz on 2008-02-11 09:44:42 as **
  • DNA methylation reprogramming in the germ line.
    Epigenetics, Vol. 3, No. 1. (9 January 2008)
    by Diane J Lees-Murdock, Colum P Walsh
  • Cohesins Functionally Associate with CTCF on Mammalian Chromosome Arms.
    Cell (29 January 2008)
    by Vania Parelho, Suzana Hadjur, Mikhail Spivakov, Marion Leleu, Stephan Sauer, Heather C C Gregson, Adam Jarmuz, Claudia Canzonetta, Zoe Webster, Tatyana Nesterova, Bradley S S Cobb, Kyoko Yokomori, Niall Dillon, Luis Aragon, Amanda G G Fisher, Matthias Merkenschlager
  • Cohesin mediates transcriptional insulation by CCCTC-binding factor
    Nature (30 January 2008)
    by Kerstin S Wendt, Keisuke Yoshida, Takehiko Itoh, Masashige Bando, Birgit Koch, Erika Schirghuber, Shuichi Tsutsumi, Genta Nagae, Ko Ishihara, Tsuyoshi Mishiro, Kazuhide Yahata, Fumio Imamoto, Hiroyuki Aburatani, Mitsuyoshi Nakao, Naoko Imamoto, Kazuhiro Maeshima, Katsuhiko Shirahige, Jan-Michael Peters
  • A novel CpG island set identifies tissue-specific methylation at developmental gene loci.
    PLoS Biol, Vol. 6, No. 1. (January 2008)
  • Identification of the control region for tissue-specific imprinting of the stimulatory G protein alpha-subunit.
    Proc Natl Acad Sci U S A, Vol. 102, No. 15. (12 April 2005), pp. 5513-5518.
    by J Liu, M Chen, C Deng, D Bourc'his, JG Nealon, B Erlichman, TH Bestor, LS Weinstein
    posted to dna dnmt3l epigenetics expression gene gnas gnasxl imprinting methylation nesp by rschulz on 2008-02-07 10:59:57 as read
  • Dnmt3L and the establishment of maternal genomic imprints.
    Science, Vol. 294, No. 5551. (21 December 2001), pp. 2536-2539.
    by D Bourc'his, GL Xu, CS Lin, B Bollman, TH Bestor
    posted to dna dnmt3l epigenetics imprinting maternal methylation by rschulz on 2008-02-07 10:24:42 as **
  • Imprinting regulation of the murine Meg1/Grb10 and human GRB10 genes; roles of brain-specific promoters and mouse-specific CTCF-binding sites.
    Nucleic Acids Res, Vol. 31, No. 5. (1 March 2003), pp. 1398-1406.
  • Zac1 regulates an imprinted gene network critically involved in the control of embryonic growth.
    Dev Cell, Vol. 11, No. 5. (November 2006), pp. 711-722.
    posted to development embryo epigenetics growth imprinting network zac1 by rschulz on 2008-02-04 15:06:54 as **
  • Role of retrotransposon-derived imprinted gene, Rtl1, in the feto-maternal interface of mouse placenta
    Nature Genetics, Vol. 40, No. 2. (06 January 2008), pp. 243-248.
    by Yoichi Sekita, Hirotaka Wagatsuma, Kenji Nakamura, Ryuichi Ono, Masayo Kagami, Noriko Wakisaka, Toshiaki Hino, Rika Suzuki-Migishima, Takashi Kohda, Atsuo Ogura, Tsutomu Ogata, Minesuke Yokoyama, Tomoko Kaneko-Ishino, Fumitoshi Ishino
  • Deletions and epimutations affecting the human 14q32.2 imprinted region in individuals with paternal and maternal upd(14)-like phenotypes
    Nature Genetics, Vol. 40, No. 2. (06 January 2008), pp. 237-242.
    by Masayo Kagami, Yoichi Sekita, Gen Nishimura, Masahito Irie, Fumiko Kato, Michiyo Okada, Shunji Yamamori, Hiroshi Kishimoto, Masahiro Nakayama, Yukichi Tanaka, Kentarou Matsuoka, Tsutomu Takahashi, Mika Noguchi, Yoko Tanaka, Kouji Masumoto, Takeshi Utsunomiya, Hiroko Kouzan, Yumiko Komatsu, Hirofumi Ohashi, Kenji Kurosawa, Kenjirou Kosaki, Anne C Ferguson-Smith, Fumitoshi Ishino, Tsutomu Ogata
  • Epigenetic regulation and the variability of gene expression.
    Nat Genet, Vol. 40, No. 2. (February 2008), pp. 141-147.
    by JK Choi, YJ Kim
  • Comparative phylogenetic analysis of blcap/nnat reveals eutherian-specific imprinted gene.
    Mol Biol Evol, Vol. 22, No. 8. (August 2005), pp. 1740-1748.
    by HK Evans, JR Weidman, DO Cowley, RL Jirtle
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