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nedwards's Nesvizhskii [11 articles]

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  • Semisupervised model-based validation of Peptide identifications in mass spectrometry-based proteomics.
    J Proteome Res, Vol. 7, No. 1. (January 2008), pp. 254-265.
    by H Choi, AI Nesvizhskii
    posted to machine-learning peptide-identification peptide-identification-statistics proteomics tandem-mass-spectrometry by nedwards on 2008-02-01 18:47:35 as ** along with 1 person jyuh
  • Improving Sensitivity by Probabilistically Combining Results from Multiple MS/MS Search Methodologies
    J. Proteome Res., Vol. 7, No. 1. (4 January 2008), pp. 245-253.
    by Brian C Searle, Mark Turner, Alexey I Nesvizhskii
    posted to machine-learning peptide-identification peptide-identification-combiners proteomics tandem-mass-spectrometry by nedwards on 2008-02-01 18:43:14 as **
  • notes Experimental Protein Mixture for Validating Tandem Mass Spectral Analysis
    OMICS: A Journal of Integrative Biology, Vol. 6, No. 2. (2002), pp. 207-212.
    by Andrew Keller, Samuel Purvine, Alexey I Nesvizhskii, Sergey Stolyar, David R Goodlett, Eugene Kolker
    posted to proteomics proteomics-data-repository by nedwards on 2007-11-21 14:05:51 as **
  • Analysis and validation of proteomic data generated by tandem mass spectrometry
    Nat Meth, Vol. 4, No. 10. (October 2007), pp. 787-797.
    by Alexey Nesvizhskii, Olga Vitek, Ruedi Aebersold
    posted to peptide-identification peptide-identification-statistics proteomics tandem-mass-spectrometry by nedwards on 2007-11-07 16:03:29 as ** along with 2 people jyuh fishtank
  • Empirical Statistical Model To Estimate the Accuracy of Peptide Identifications Made by MS/MS and Database Search
    Anal. Chem., Vol. 74, No. 20. (15 October 2002), pp. 5383-5392.
    by A Keller, AI Nesvizhskii, E Kolker, R Aebersold
    posted to peptide-identification peptide-identification-statistics proteomics tandem-mass-spectrometry by nedwards on 2007-09-19 18:47:39 as **
  • The PeptideAtlas project.
    Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006)
    by F Desiere, EW Deutsch, NL King, AI Nesvizhskii, P Mallick, J Eng, S Chen, J Eddes, SN Loevenich, R Aebersold
    posted to peptide-atlas proteomics by nedwards on 2007-08-08 14:21:45 as **
  • Dynamic spectrum quality assessment and iterative computational analysis of shotgun proteomic data: toward more efficient identification of post-translational modifications, sequence polymorphisms, and novel peptides.
    Mol Cell Proteomics, Vol. 5, No. 4. (April 2006), pp. 652-670.
    by AI Nesvizhskii, FF Roos, J Grossmann, M Vogelzang, JS Eddes, W Gruissem, S Baginsky, R Aebersold
    posted to genome-annotation peptide-identification proteomics tandem-mass-spectrometry by nedwards on 2007-08-08 14:21:13 as **
  • A statistical model for identifying proteins by tandem mass spectrometry.
    Anal Chem, Vol. 75, No. 17. (1 September 2003), pp. 4646-4658.
    by AI Nesvizhskii, A Keller, E Kolker, R Aebersold
    posted to protein-identification proteomics tandem-mass-spectrometry by nedwards on 2007-08-08 13:59:07 as ** along with 1 person kallberg
  • Do we want our data raw? Including binary mass spectrometry data in public proteomics data repositories.
    Proteomics, Vol. 5, No. 13. (August 2005), pp. 3501-3505.
    by L Martens, AI Nesvizhskii, H Hermjakob, M Adamski, GS Omenn, J Vandekerckhove, K Gevaert
    posted to hupo-ppp proteomics proteomics-data-standards by nedwards on 2007-08-08 13:57:19 as ** along with 3 people agileproteomics pgan olberd
  • Analysis of the S. cerevisiae proteome with PeptideAtlas
    Genome Biology, Vol. 7 (13 November 2006), R106.
    by Nichole L King, Eric W Deutsch, Jeffrey A Ranish, Alexey I Nesvizhskii, James S Eddes, Parag Mallick, Jimmy Eng, Frank Desiere, Mark Flory, Daniel B Martin, Bong Kim, Hookeun Lee, Brian Raught, Ruedi Aebersold
    posted to peptide-atlas peptide-identification proteomics tandem-mass-spectrometry by nedwards on 2007-08-08 13:42:41 as **
  • Integration with the human genome of peptide sequences obtained by high-throughput mass spectrometry
    Genome Biology, Vol. 6, No. 1. (2004)
    by Frank Desiere, Eric Deutsch, Alexey Nesvizhskii, Parag Mallick, Nichole King, Jimmy Eng, Alan Aderem, Rose Boyle, Erich Brunner, Samuel Donohoe, Nelson Fausto, Ernst Hafen, Lee Hood, Michael Katze, Kathleen Kennedy, Floyd Kregenow, Hookeun Lee, Biaoyang Lin, Dan Martin, Jeffrey Ranish, David Rawlings, Lawrence Samelson, Yuzuru Shiio, Julian Watts, Bernd Wollscheid, Michael Wright, Wei Yan, Lihong Yang, Eugene Yi, Hui Zhang, Ruedi Aebersold
    posted to genome-annotation peptide-atlas peptide-identification proteomics tandem-mass-spectrometry by nedwards on 2007-08-08 13:40:47 as **
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