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natstreet's library [2604 articles]

最近录入 natstreet's 文献库.
  • High-Throughput Sequencing of Arabidopsis microRNAs: Evidence for Frequent Birth and Death of MIRNA Genes.
    PLoS ONE, Vol. 2 (2007)
    by N Fahlgren, MD Howell, KD Kasschau, EJ Chapman, CM Sullivan, JS Cumbie, SA Givan, TF Law, SR Grant, JL Dangl, JC Carrington
    posted to no-tag by natstreet on 2008-07-18 09:08:22 as ** along with 3 people and 1 group jmjimenez tardigrade andersbj microRNA
  • Assessing performance of orthology detection strategies applied to eukaryotic genomes.
    PLoS ONE, Vol. 2 (2007)
    by F Chen, AJ Mackey, JK Vermunt, DS Roos
    posted to no-tag by natstreet on 2008-07-18 09:06:05 as ** along with 7 people and 3 groups icases operon rvosa indigoviolet stajich cjeans winterschlaefer EisenLab FAB-lab TNT
  • Genomics and genome-wide association studies: An integrative approach to expression QTL mapping
    Genomics, Vol. In Press, Corrected Proof
    by James H Degnan, Jessica Lasky-Su, Benjamin A Raby, Mousheng Xu, Cliona Molony, Eric E Schadt, Christoph Lange
    posted to no-tag by natstreet on 2008-07-17 09:12:20 as ** along with 1 person jyuh
  • Genomewide comparative phylogenetic and molecular evolutionary analysis of tubby-like protein family in Arabidopsis, rice, and poplar.
    Genomics (9 July 2008)
    by Zefeng Yang, Yong Zhou, Xuefeng Wang, Shiliang Gu, Jianmin Yu, Guohua Liang, Changjie Yan, Chenwu Xu
    posted to no-tag by natstreet on 2008-07-17 09:10:16 as **
  • A role for gene duplication and natural variation of gene expression in the evolution of metabolism.
    PLoS ONE, Vol. 3, No. 3. (2008)
    by DJ Kliebenstein
    posted to no-tag by natstreet on 2008-07-15 14:58:59 as **
  • The roles of segmental and tandem gene duplication in the evolution of large gene families in Arabidopsis thaliana.
    BMC Plant Biol, Vol. 4, No. 1. (1 June 2004)
    by SB Cannon, A Mitra, A Baumgarten, ND Young, G May
    posted to no-tag by natstreet on 2008-07-15 14:55:22 as ** along with 3 people zhlei arNQ dandaman
  • Seeing double: gene duplication and diversification in plant secondary metabolism
    Trends in Plant Science, Vol. 10, No. 9. (September 2005), pp. 444-449.
    by Dietrich Ober
    posted to no-tag by natstreet on 2008-07-15 14:51:04 as **
  • Birth and Rapid Subcellular Adaptation of a Hominoid-Specific CDC14 Protein
    PLoS Biology, Vol. 6, No. 6. (1 June 2008), e140.
    by Lia Rosso, Ana C Marques, Manuela Weier, Nelle Lambert, Marie-Alexandra Lambot, Pierre Vanderhaeghen, Henrik Kaessmann
    posted to no-tag by natstreet on 2008-07-15 14:49:08 as ** along with 2 people shoshin djkt
  • Direct profiling and imaging of plant metabolites in intact tissues by using colloidal graphite-assisted laser desorption ionization mass spectrometry
    The Plant Journal, Vol. 55, No. 2. (July 2008), pp. 348-360.
    by Cha, Sangwon, Zhang, Hui, Ilarslan, I Hilal, Wurtele, Eve Syrkin, Brachova, Libuse, Nikolau, J Basil, Yeung, S Edward
    posted to no-tag by natstreet on 2008-07-15 11:17:28 as **
  • Gene silencing in plants using artificial microRNAs and other small RNAs
    The Plant Journal, Vol. 53, No. 4. (February 2008), pp. 674-690.
    by Ossowski, Stephan, Schwab, Rebecca, Weigel, Detlef
    posted to no-tag by natstreet on 2008-07-15 11:10:15 as **
  • Highly Specific Gene Silencing by Artificial miRNAs in Rice
    PLoS ONE, Vol. 3, No. 3. (19 March 2008), e1829.
    by Norman Warthmann, Hao Chen, Stephan Ossowski, Detlef Weigel, Philippe Hervé
    posted to no-tag by natstreet on 2008-07-15 11:09:18 as **
  • Differential Responses of the Cultivated and Wild Species of Soybean to Dehydration Stress
    Crop Sci, Vol. 46, No. 5. (8 September 2006), pp. 2041-2046.
    by Yanyun Chen, Pengyin Chen, de Los
    posted to no-tag by natstreet on 2008-07-15 10:33:17 as **
  • At-TAX: a whole genome tiling array resource for developmental expression analysis and transcript identification in Arabidopsis thaliana
    Genome Biology, Vol. 9, No. 7. (2008)
    by Sascha Laubinger, Georg Zeller, Stefan Henz, Timo Sachsenberg, Christian Widmer, Naira Naouar, Marnik Vuylsteke, Bernhard Scholkopf, Gunnar Ratsch, Detlef Weigel
    posted to no-tag by natstreet on 2008-07-15 09:33:45 as **
  • Cross-platform comparison of SYBR Green real-time PCR with TaqMan PCR, microarrays and other gene expression measurement technologies evaluated in the MicroArray Quality Control (MAQC) study
    BMC Genomics, Vol. 9 (11 July 2008), 328.
    by Emi Arikawa, Yanyang Sun, Jie Wang, Qiong Zhou, Baitang Ning, Stacey L Dial, Lei Guo, Jingping Yang
    posted to no-tag by natstreet on 2008-07-15 07:31:13 as ** along with 1 person jyuh
  • Transcriptional profiling of the pea shoot apical meristem reveals processes underlying its function and maintenance
    BMC Plant Biology, Vol. 8 (30 June 2008), 73.
    by Chui E Wong, Prem L Bhalla, Harald Ottenhof, Mohan Singh
    posted to no-tag by natstreet on 2008-07-15 07:28:50 as **
  • Concerted gene recruitment in early plant evolution
    Genome Biology, Vol. 9 (08 July 2008), R109.
    by Jinling Huang, Peter J Gogarten
    posted to no-tag by natstreet on 2008-07-15 07:23:41 as ** along with 1 person bcondon
  • Comparative analysis reveals signatures of differentiation amid genomic polymorphism in Lake Malawi cichlids
    Genome Biology, Vol. 9 (10 July 2008), R113.
    by Yong-Hwee E Loh, Lee S Katz, Meryl C Mims, Thomas D Kocher, Soojin Yi, Jeffrey T Streelman
    posted to no-tag by natstreet on 2008-07-15 07:22:09 as ** along with 1 person Neeperando
  • High-throughput gene and SNP discovery in Eucalyptus grandis, an uncharacterized genome
    BMC Genomics, Vol. 9, No. 1. (2008)
    by Evandro Novaes, Derek Drost, William Farmerie, Georgios Pappas, Dario Grattapaglia, Ronald Sederoff, Matias Kirst
    posted to no-tag by natstreet on 2008-07-10 17:47:37 as ** along with 1 person gpappas
  • Accurate detection of aneuploidies in array CGH and gene expression microarray data
    Bioinformatics, Vol. 20, No. 18. (2004), pp. 3533-3543.
    by Chad L Myers, Maitreya J Dunham, SY Kung, Olga G Troyanskaya
    posted to popgenie-ms by natstreet on 2008-07-10 10:23:19 as **
  • Visualization-based discovery and analysis of genomic aberrations in microarray data.
    BMC Bioinformatics, Vol. 6 (2005), 146.
    by CL Myers, X Chen, OG Troyanskaya
    posted to popgenie-ms by natstreet on 2008-07-10 10:22:18 as ** along with 1 person bioguru2000
  • Calcium accumulation in the wood of short-rotation cottonwood species: effects on pulp properties
    Wood Science and Technology, Vol. 37, No. 3. (1 December 2003), pp. 321-329.
    by Simon Potter, Sandra Reath, Ashif Hussein, Wai Gee, Val Lawrence, James Drummond
    posted to family-331 by natstreet on 2008-07-09 15:17:15 as **
  • PRIMEGENS-v2: Genome-wide primer design for analyzing DNA methylation patterns of CpG islands
    Bioinformatics (25 June 2008), btn320.
    by Gyan P Srivastava, Juyuan Guo, Huidong Shi, Dong Xu
    posted to no-tag by natstreet on 2008-07-08 17:30:46 as ** along with 2 people kjglennie jyuh
  • Bioenergy from plants and the sustainable yield challenge
    New Phytologist, Vol. 179, No. 1. (July 2008), pp. 15-32.
    by Angela Karp, Ian Shield
    posted to no-tag by natstreet on 2008-07-08 11:05:49 as ** along with 1 person jwm
  • An "electronic fluorescent pictograph" browser for exploring and analyzing large-scale biological data sets.
    PLoS ONE, Vol. 2 (2007), e718.
    by D Winter, B Vinegar, H Nahal, R Ammar, GV Wilson, NJ Provart
    posted to popgenie-ms by natstreet on 2008-07-02 11:41:00 as ** along with 1 person jyuh
  • DBD: a transcription factor prediction database.
    Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006), pp. 74-81.
    by SK Kummerfeld, SA Teichmann
    posted to popgenie-ms by natstreet on 2008-07-02 11:38:09 as ** along with 5 people and 1 group mariakmejia troels_marstrand gpalidwor nickluscombe nklee EBI-regulation
  • DBD--taxonomically broad transcription factor predictions: new content and functionality.
    Nucleic acids research, Vol. 36, No. Database issue. (January 2008), pp. 88-92.
    by D Wilson, V Charoensawan, SK Kummerfeld, SA Teichmann
    posted to popgenie-ms by natstreet on 2008-07-02 11:36:28 as **
  • VISTA : visualizing global DNA sequence alignments of arbitrary length.
    Bioinformatics (Oxford, England), Vol. 16, No. 11. (November 2000), pp. 1046-1047.
    by C Mayor, M Brudno, JR Schwartz, A Poliakov, EM Rubin, KA Frazer, LS Pachter, I Dubchak
    posted to popgenie-ms by natstreet on 2008-07-02 11:31:37 as ** along with 1 person AaronDarling
  • VISTA: computational tools for comparative genomics.
    Nucleic acids research, Vol. 32, No. Web Server issue. (1 July 2004), pp. 273-279.
    by KA Frazer, L Pachter, A Poliakov, EM Rubin, I Dubchak
    posted to popgenie-ms by natstreet on 2008-07-02 11:29:19 as ** along with 1 person and 1 group Auger Dead 60's
  • Web-based analysis of the mouse transcriptome using Genevestigator
    BMC Bioinformatics, Vol. 7 (21 June 2006), 311.
    by Oliver Laule, Matthias Hirsch-Hoffmann, Tomas Hruz, Wilhelm Gruissem, Philip Zimmermann
    posted to popgenie-ms by natstreet on 2008-07-02 11:26:08 as **
  • GENEVESTIGATOR. Arabidopsis microarray database and analysis toolbox.
    Plant Physiol, Vol. 136, No. 1. (September 2004), pp. 2621-2632.
    by P Zimmermann, M Hirsch-Hoffmann, L Hennig, W Gruissem
    posted to popgenie-ms by natstreet on 2008-07-02 11:25:19 as ** along with 1 person and 1 group kengg Plantandetc
  • Populus: Arabidopsis for Forestry. Do We Need a Model Tree?
    Ann Bot, Vol. 90, No. 6. (1 December 2002), pp. 681-689.
    by GAIL Taylor
    posted to popgenie-ms by natstreet on 2008-07-02 11:08:54 as **
  • FlyBase: integration and improvements to query tools.
    Nucleic Acids Res, Vol. 36, No. Database issue. (January 2008), pp. 588-593.
    by RJ Wilson, JL Goodman, VB Strelets
    posted to popgenie-ms by natstreet on 2008-07-02 09:21:13 as ** along with 1 person jyuh
  • Phytome: a platform for plant comparative genomics.
    Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006)
    by S Hartmann, D Lu, J Phillips, TJ Vision
    posted to no-tag by natstreet on 2008-07-02 09:20:22 as **
  • PlantTFDB: a comprehensive plant transcription factor database.
    Nucleic acids research, Vol. 36, No. Database issue. (January 2008), pp. 966-969.
    by AY Guo, X Chen, G Gao, H Zhang, QH Zhu, XC Liu, YF Zhong, X Gu, K He, J Luo
    posted to popgenie-ms by natstreet on 2008-07-02 09:20:03 as **
  • Pfam: clans, web tools and services.
    Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006), pp. 247-251.
    by RD Finn, J Mistry, B Schuster-Böckler, S Griffiths-Jones, V Hollich, T Lassmann, S Moxon, M Marshall, A Khanna, R Durbin, SR Eddy, EL Sonnhammer, A Bateman
    posted to popgenie-ms by natstreet on 2008-07-02 09:19:27 as ** along with 8 people gbart dullhunk massivemayhem cjeans siebertm lpfernandes pablomendes antonkratz
  • The COG database: an updated version includes eukaryotes.
    BMC Bioinformatics, Vol. 4 (11 September 2003), 41.
    by RL Tatusov, ND Fedorova, JD Jackson, AR Jacobs, B Kiryutin, EV Koonin, DM Krylov, R Mazumder, SL Mekhedov, AN Nikolskaya, BS Rao, S Smirnov, AV Sverdlov, S Vasudevan, YI Wolf, JJ Yin, DA Natale
    posted to popgenie-ms by natstreet on 2008-07-02 09:16:42 as ** along with 6 people and 1 group arve indigoviolet j3xucite treangen bluto westoll EisenLab
  • KEGG for linking genomes to life and the environment
    Nucleic Acids Research, Vol. 36 (12 December 2008), pp. 480-484.
    by Minoru Kanehisa, Michihiro Araki, Susumu Goto, Masahiro Hattori, Mika Hirakawa, Masumi Itoh, Toshiaki Katayama, Shuichi Kawashima, Shujiro Okuda, Toshiaki Tokimatsu, Yoshihiro Yamanishi
    posted to popgenie-ms by natstreet on 2008-07-02 09:15:21 as ** along with 9 people TheresaNiederberger hpaces massivemayhem irenas jyuh raiyar barriot renatomilani shung
  • From genomics to chemical genomics: new developments in KEGG.
    Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006), pp. 354-357.
    by M Kanehisa, S Goto, M Hattori, KF Aoki-Kinoshita, M Itoh, S Kawashima, T Katayama, M Araki, M Hirakawa
    posted to popgenie-ms by natstreet on 2008-07-02 09:15:11 as ** along with 13 people jyuh aalibes kuhn balajis alexg eweaver tny dullhunk michC frohike incovoma sgoetz yggdrasil
  • KEGG: kyoto encyclopedia of genes and genomes.
    Nucleic Acids Res, Vol. 28, No. 1. (1 January 2000), pp. 27-30.
    by M Kanehisa, S Goto
    posted to popgenie-ms by natstreet on 2008-07-02 09:14:57 as ** along with 10 people grottenolm Evangelia dquest j3xucite fisherp koerner ruvido noby naegele katerinakal
  • Genetic Variation of Stomatal Traits and Carbon Isotope Discrimination in Two Hybrid Poplar Families (Populus deltoides 'S9-2' x P. nigra 'Ghoy' and P. deltoides 'S9-2' x P. trichocarpa 'V24')
    Ann Bot (27 June 2008), mcn107.
    by Sophie Y Dillen, Nicolas Marron, Barbra Koch, Reinhart Ceulemans
    posted to no-tag by natstreet on 2008-07-02 08:05:15 as **
  • Genetic Transformation of Populus trichocarpa Genotype Nisqually-1: A Functional Genomic Tool for Woody Plants
    Plant and Cell Physiology, Vol. 47, No. 11. (November 2006), pp. 1582-1589.
    by Song, Jingyuan, Lu, Shanfa, Chen, Zenn-Zong, Lourenco, Rodrigo, Chiang, L Vincent
    posted to popgenie-ms by natstreet on 2008-07-01 15:49:03 as **
  • Changes to gene expression associated with hybrid speciation in plants: further insights from transcriptomic studies in Senecio
    Philosophical Transactions of the Royal Society B: Biological Sciences
    by Matthew J Hegarty, Gary L Barker, Adrian C Brennan, Keith J Edwards, Richard J Abbott, Simon J Hiscock
    posted to no-tag by natstreet on 2008-06-28 10:01:53 as **
  • Review. The genic view of plant speciation: recent progress and emerging questions
    Philosophical Transactions of the Royal Society B: Biological Sciences
    by Christian Lexer, Alex Widmer
    posted to no-tag by natstreet on 2008-06-28 10:01:04 as **
  • ViroBLAST: A standalone BLAST web server for flexible queries of multiple databases and user's datasets.
    Bioinformatics, Vol. 23 (5 July 2007), pp. 2334-2336.
    by Wenjie Deng, David CC Nickle, Gerald HH Learn, Brandon Maust, James II Mullins
    posted to popgenie-ms by natstreet on 2008-06-23 12:37:30 as ** along with 1 person jyuh
  • Chromosomal location and gene paucity of the male specific region on papaya Y chromosome
    Molecular Genetics and Genomics, Vol. 278, No. 2. (August 2007), pp. 177-185.
    by Yu, Qingyi, Hou, Shaobin, Hobza, Roman, Feltus, , Wang, Xiue, Jin, Weiwei, Skelton, Rachel, Blas, Andrea, Lemke, Cornelia, Saw, Jimmy, Moore, Paul, Alam, Maqsudul, Jiang, Jiming, Paterson, Andrew, Vyskot, Boris, Ming, Ray
    posted to no-tag by natstreet on 2008-06-19 18:29:50 as **
  • Low XY divergence in four pairs of papaya sex-linked genes
    The Plant Journal, Vol. 53, No. 1. (January 2008), pp. 124-132.
    by Yu, Qingyi, Hou, Shaobin, Feltus, F Alex, Jones, R Meghan, Murray, E Jan, Veatch, Olivia, Lemke, Cornelia, Saw, H Jimmy, Moore, C Richard, Thimmapuram, Jyothi, Liu, Lei, Moore, H Paul, Alam, Maqsudul, Jiang, Jiming, Paterson, H Andrew, Ming, Ray
    posted to no-tag by natstreet on 2008-06-19 18:29:32 as **
  • A primitive Y chromosome in papaya marks incipient sex chromosome evolution
    Nature, Vol. 427, No. 6972. (22 January 2004), pp. 348-352.
    by Zhiyong Liu, Paul H Moore, Hao Ma, Christine M Ackerman, Makandar Ragiba, Qingyi Yu, Heather M Pearl, Minna S Kim, Joseph W Charlton, John I Stiles, Francis T Zee, Andrew H Paterson, Ray Ming
    posted to no-tag by natstreet on 2008-06-19 18:29:15 as **
  • Suppression subtractive hybridization-mediated transcriptome analysis from multiple tissues of aspen ( Populus tremuloides) altered in phenylpropanoid metabolism
    Planta, Vol. 219, No. 4. (2004), pp. 694-704.
    by Priya Ranjan, Yu-Ying Kao, Hongying Jiang, Chandrashekhar P Joshi, Scott A Harding, Chung-Jui Tsai
    posted to popgenie-ms by natstreet on 2008-06-18 15:32:40 as **
  • Gene Expression Omnibus: NCBI gene expression and hybridization array data repository
    Nucl. Acids Res., Vol. 30, No. 1. (1 January 2002), pp. 207-210.
    by Ron Edgar, Michael Domrachev, Alex E Lash
    posted to no-tag by natstreet on 2008-06-18 08:15:48 as ** along with 4 people enzosetot bertelsen abhik nicholso
  • Biophysics of leaf growth of hybrid poplar: impact of ozone
    New Phytologist, Vol. 118, No. 3. (1991), pp. 407-415.
    by DL Frost, GAIL Taylor, WJ Davies
    posted to no-tag by natstreet on 2008-06-16 08:19:00 as **
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