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maralena's library [489 articles]

最近录入 maralena's 文献库.
  • PathCluster: a framework for gene set-based hierarchical clustering.
    Bioinformatics (Oxford, England) (15 July 2008)
    by Tae-Min M Kim, Seon-Hee H Yim, Yong-Bok B Jeong, Yu-Chae C Jung, Yeun-Jun J Chung
    posted to hierarchical cluster by maralena on 2008-07-18 08:47:38 as ** along with 1 person shigepong
  • Primary microRNA transcript retention at sites of transcription leads to enhanced microRNA production.
    The Journal of cell biology, Vol. 182, No. 1. (14 July 2008), pp. 61-76.
    by JM Pawlicki, JA Steitz
    posted to transcription primary microrna by maralena on 2008-07-17 10:27:00 as **
  • Functional organisation of Escherichia coli transcriptional regulatory network
    Journal of Molecular Biology, Vol. 381, No. 1. (1 August 2008), pp. 238-247.
    by Agustino Martínez-Antonio, Sarath C Janga, Denis Thieffry
    posted to transcription regulatory network ecoli by maralena on 2008-07-17 10:24:47 as ** along with 1 person jjray
  • Mouse let-7 miRNA populations exhibit RNA editing that is constrained in the 5'-seed/cleavage/anchor regions and stabilize predicted mmu-let-7a:mRNA duplexes
    Genome Res. (9 July 2008), gr.078246.108.
    by Jeffrey G Reid, Francis C Lynn, Ankur K Nagaraja, Rafal B Drabek, Donna M Muzny, Chad A Shaw, Michelle K Weiss, Arash O Naghavi, Mahjabeen F Khan, Huifeng Zhu, Gemunu H Gunaratne, David B Corry, Jonathan N Miller, Michael S German, Richard A Gibbs, Martin M Matzuk, Preethi H Gunaratne
    posted to mouse microrna let-7 by maralena on 2008-07-14 08:04:52 as ** along with 1 person bootsy
  • MicroRNA regulation and the variability of human cortical gene expression.
    Nucleic acids research (10 July 2008)
    by Rui Zhang, Bing Su
    posted to regulation microrna human gene expression by maralena on 2008-07-14 08:04:29 as ** along with 1 person bootsy
  • Coherent Coupling of Feedback Loops: A Design Principle of Cell Signaling Networks.
    Bioinformatics (Oxford, England) (2 July 2008)
    by Yung-Keun K Kwon, Kwang-Hyun H Cho
    posted to signaling principle network loop feedback by maralena on 2008-07-09 08:04:36 as ** along with 2 people jjray bootsy
  • Identifying gene-disease associations using centrality on a literature mined gene-interaction network
    Bioinformatics, Vol. 24, No. 13. (1 July 2008), pp. i277-285.
    by Arzucan Ozgur, Thuy Vu, Gunes Erkan, Dragomir R Radev
    posted to network literature interaction gene disease by maralena on 2008-07-02 09:06:36 as **
  • The mechanism of micro-RNA-mediated translation repression is determined by the promoter of the target gene
    Proceedings of the National Academy of Sciences (25 June 2008), 0800650105.
    by Yi W Kong, Ian G Cannell, Cornelia H de Moor, Kirsti Hill, Paul G Garside, Tiffany L Hamilton, Hedda A Meijer, Helen C Dobbyn, Mark Stoneley, Keith A Spriggs, Anne E Willis, Martin Bushell
    posted to repression promoter microrna mechanism by maralena on 2008-06-28 13:40:02 as ** along with 1 person bootsy
  • BioGraphE: high-performance bionetwork analysis using the Biological Graph Environment
    BMC Bioinformatics, Vol. 9, No. Suppl 6. (2008)
    by George Chin, Daniel Chavarria, Grant Nakamura, Heidi Sofia
    posted to network graph by maralena on 2008-06-28 13:39:49 as ** along with 1 person jyuh
  • An activity-regulated microRNA controls dendritic plasticity by down-regulating p250GAP.
    Proceedings of the National Academy of Sciences of the United States of America (24 June 2008)
    by Gary A A Wayman, Monika Davare, Hideaki Ando, Dale Fortin, Olga Varlamova, Hai-Ying M Y Cheng, Daniel Marks, Karl Obrietan, Thomas R R Soderling, Richard H H Goodman, Soren Impey
    posted to p250gap mir-132 microrna by maralena on 2008-06-27 08:27:44 as **
  • MicroRNA Expression and Identification of Putative miRNA Targets in Ovarian Cancer
    PLoS ONE, Vol. 3, No. 6. (18 June 2008), e2436.
    by Neetu Dahiya, Cheryl A Sherman-Baust, Tian-Li Wang, Ben Davidson, Ie-Ming Shih, Yongqing Zhang, William Wood, Kevin G Becker, Patrice J Morin
    posted to target microrna expression cancer by maralena on 2008-06-19 08:06:37 as ** along with 1 person ealloza
  • Inducible expression of microRNA-194 is regulated by HNF-1alpha during intestinal epithelial cell differentiation.
    RNA (New York, N.Y.) (20 May 2008)
    by Kimihiro Hino, Kiichiro Tsuchiya, Taro Fukao, Kotaro Kiga, Ryuichi Okamoto, Takanori Kanai, Mamoru Watanabe
    posted to mir-194 microrna hnf1 differentiation by maralena on 2008-06-19 08:03:59 as ** along with 1 person bootsy
  • A novel noncoding RNA processed by Drosha is restricted to nucleus in mouse
    RNA, Vol. 14, No. 7. (1 July 2008), pp. 1399-1410.
    by Gayatri Ganesan, Satyanarayana M Rao
    posted to nucleus ncrna mouse drosha by maralena on 2008-06-19 08:03:15 as **
  • The 3'-UTR mediates the cellular localization of an mRNA encoding a short plasma membrane protein
    RNA, Vol. 14, No. 7. (1 July 2008), pp. 1352-1365.
    by Adi Loya, Lilach Pnueli, Yahav Yosefzon, Ydo Wexler, Michal Ziv-Ukelson, Yoav Arava
    posted to mrna 3utr by maralena on 2008-06-19 08:02:47 as **
  • Integrating large-scale functional genomic data to dissect the complexity of yeast regulatory networks.
    Nature genetics (15 June 2008)
    by Jun Zhu, Bin Zhang, Erin N N Smith, Becky Drees, Rachel B B Brem, Leonid Kruglyak, Roger E E Bumgarner, Eric E E Schadt
    posted to yeast regulatory network by maralena on 2008-06-18 07:59:09 as ** along with 9 people caseybrown djkt marck roys jyuh realzhang kengg tmmurali ptrobajo
  • Imbalance between pSmad3 and Notch induces CDK inhibitors in old muscle stem cells
    Nature (15 June 2008)
    by Morgan E Carlson, Michael Hsu, Irina M Conboy
    posted to stemcell smad notch muscle by maralena on 2008-06-18 07:58:48 as **
  • Discovering functional interaction patterns in protein-protein interaction networks
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Mehmet Turanalp, Tolga Can
    posted to ppi network interaction by maralena on 2008-06-16 08:23:23 as ** along with 2 people renatomilani Tingting
  • SMAD proteins control DROSHA-mediated microRNA maturation
    Nature (11 June 2008)
    by Brandi N Davis, Aaron C Hilyard, Giorgio Lagna, Akiko Hata
    posted to smad mir-21 microna drosha by maralena on 2008-06-16 08:22:04 as **
  • Comparative Pathway Analyzer--a web server for comparative analysis, clustering and visualization of metabolic networks in multiple organisms.
    Nucleic acids research (6 June 2008)
    by Sebastian Oehm, David Gilbert, Andreas Tauch, Jens Stoye, Alexander Goesmann
    posted to pathway network clustering analysis by maralena on 2008-06-11 08:24:33 as ** along with 2 people renatomilani thomaskelder
  • Downregulation of MIRNA-1/MIRNA-133 contributes to re-expression of pacemaker channel genes HCN2 and HCN4 in hypertrophic heart.
    The Journal of biological chemistry (5 May 2008)
    by Xiaobin Luo, Huixian Lin, Zhengwei Pan, Jiening Xiao, Yong Zhang, Yanjie Lu, Baofeng Yang, Zhiguo Wang
    posted to regulation mir-133 mir-1 microrna heart hcn4 hcn2 by maralena on 2008-06-10 10:16:40 as ** along with 1 person bootsy
  • MicroRNA regulation and interspecific variation of gene expression.
    Trends Genet (3 May 2007)
    by Qinghua Cui, Zhenbao Yu, Enrico O O Purisima, Edwin Wang
    posted to regulation microrna expression by maralena on 2008-06-10 07:53:47 as ** along with 4 people and 4 groups tardigrade andersbj dchughes heliopais Bioinformatics microRNA G4ID Genetics-of-Gambling
  • MicroRNA regulation of messenger-like noncoding RNAs: a network of mutual microRNA control
    Trends in Genetics, Vol. In Press, Corrected Proof
    by Yi Zhao, Shunmin He, Changning Liu, Songwei Ru, Haitao Zhao, Zhen Yang, Pengcheng Yang, Xiongyin Yuan, Shiwei Sun, Dongbo Bu, Jiefu Huang, Geir Skogerbø, Runsheng Chen
    posted to network microrna by maralena on 2008-06-04 15:15:26 as ** along with 4 people and 2 groups stajich bertelsen biozy imtechnology Berkeley Mycology microRNA
  • MicroRNA-21 Targets Sprouty2 and Promotes Cellular Outgrowths.
    Molecular biology of the cell (28 May 2008)
    by Danish Sayed, Shweta Rane, Jacqueline Lypowy, Minzhen He, Ieng-Yi Y Chen, Himanshu Vashistha, Lin Yan, Ashwani Malhotra, Dorothy Vatner, Maha Abdellatif
    posted to sprouty2 mir-21 microrna by maralena on 2008-06-02 10:08:30 as **
  • A MicroRNA Feedback Circuit in Midbrain Dopamine Neurons.
    Science, Vol. 317, No. 5842. (31 August 2007), pp. 1220-1224.
    by J Kim, K Inoue, J Ishii, WB Vanti, SV Voronov, E Murchison, G Hannon, A Abeliovich
    posted to neuron mir-133b microrna by maralena on 2008-05-30 13:17:11 as ** along with 3 people and 2 groups andersbj baikanamako bootsy Bioinformatics microRNA
  • The muscle-specific microRNAs miR-1 and miR-133 produce opposing effects on apoptosis by targeting HSP60, HSP70 and caspase-9 in cardiomyocytes
    J Cell Sci, Vol. 120, No. 17. (1 September 2007), pp. 3045-3052.
    by Chaoqian Xu, Yanjie Lu, Zhenwei Pan, Wenfeng Chu, Xiaobin Luo, Huixian Lin, Jiening Xiao, Hongli Shan, Zhiguo Wang, Baofeng Yang
    posted to muscle-specific mir-133 mir-1 microrna hsp70 hsp60 caspase-9 apoptosis by maralena on 2008-05-28 14:41:54 as **
  • Taking microRNAs to heart.
    Trends in molecular medicine (3 May 2008)
    by Thomas E E Callis, Da-Zhi Z Wang
    posted to mir-133 mir-1 microrna heart by maralena on 2008-05-28 13:34:58 as **
  • MicroRNA promoter element discovery in Arabidopsis.
    RNA (3 August 2006)
    by Molly Megraw, Vesselin Baev, Ventsislav Rusinov, Shane T T Jensen, Kriton Kalantidis, Artemis G G Hatzigeorgiou
    posted to promoter microrna arabidopsis by maralena on 2008-05-27 08:01:06 as ** along with 5 people and 1 group bootsy tardigrade cdawson byy ale GIG
  • A GATA-1-regulated microRNA locus essential for erythropoiesis
    Proceedings of the National Academy of Sciences, Vol. 105, No. 9. (4 March 2008), pp. 3333-3338.
    by Louis C Dore, Julio D Amigo, Dos, Zhe Zhang, Xiaowu Gai, John W Tobias, Duonan Yu, Alyssa M Klein, Christine Dorman, Weisheng Wu, Ross C Hardison, Barry H Paw, Mitchell J Weiss
    posted to mir-451 mir-144 microrna gata-1 by maralena on 2008-05-26 12:53:02 as ** along with 1 person bootsy
  • On the relationship between GC content and the number of predicted microRNA binding sites by MicroInspector.
    Computational biology and chemistry, Vol. 32, No. 3. (June 2008), pp. 222-226.
    by N Davis, N Biddlecom, D Hecht, GB Fogel
    posted to microrna gc by maralena on 2008-05-21 16:47:51 as ** along with 1 person and 1 group heliopais microRNA
  • Fgf8 expression defines a morphogenetic center required for olfactory neurogenesis and nasal cavity development in the mouse
    Development, Vol. 132, No. 23. (1 December 2005), pp. 5211-5223.
    by Shimako Kawauchi, Jianyong Shou, Rosaysela Santos, Jean M Hebert, Susan K Mcconnell, Ivor Mason, Anne L Calof
    posted to neurogenesis mouse fgf8 development by maralena on 2008-05-19 12:44:25 as **
  • The time of appearance of the C. elegans let-7 microRNA is transcriptionally controlled utilizing a temporal regulatory element in its promoter.
    Dev Biol, Vol. 259, No. 2. (15 July 2003), pp. 364-379.
    by SM Johnson, SY Lin, FJ Slack
    posted to regulation promoter microrna let-7 celegans by maralena on 2008-05-19 10:10:07 as ** along with 2 people tardigrade mtagaya
  • Denoising feedback loops by thresholding--a new role for microRNAs.
    Genes Dev, Vol. 20, No. 20. (15 October 2006), pp. 2769-2772.
    by SM Cohen, J Brennecke, A Stark
    posted to microrna feedback by maralena on 2008-05-16 15:48:32 as ** along with 3 people and 1 group tardigrade andersbj heliopais microRNA
  • Direct regulation of an oncogenic microRNA cluster by E2F transcription factors.
    J Biol Chem (29 November 2006)
    by Keith Woods, J Michael M Thomson, Scott M M Hammond
    posted to tf mir-17-92 microrna e2f by maralena on 2008-05-16 15:19:38 as ** along with 1 person mtagaya
  • A functional study of miR-124 in the developing neural tube.
    Genes Dev, Vol. 21, No. 5. (1 March 2007), pp. 531-536.
    by X Cao, SL Pfaff, FH Gage
    posted to mir-124 microrna development by maralena on 2008-05-16 14:22:14 as ** along with 1 person tardigrade
  • MicroRNA-155 is induced during the macrophage inflammatory response.
    Proc Natl Acad Sci U S A, Vol. 104, No. 5. (30 January 2007), pp. 1604-1609.
    by RM O'connell, KD Taganov, MP Boldin, G Cheng, D Baltimore
    posted to mir-155 microrna inflammation immune by maralena on 2008-05-16 11:43:17 as ** along with 2 people tardigrade mgantier
  • NF-kappaB-dependent induction of microRNA miR-146, an inhibitor targeted to signaling proteins of innate immune responses.
    Proc Natl Acad Sci U S A, Vol. 103, No. 33. (15 August 2006), pp. 12481-12486.
    by KD Taganov, MP Boldin, KJ Chang, D Baltimore
    posted to signaling nf_kappab mir-146 microrna immune by maralena on 2008-05-16 10:23:18 as ** along with 2 people bootsy mgantier
  • Tumour invasion and metastasis initiated by microRNA-10b in breast cancer
    Nature (26 September 2007)
    by Li Ma, Julie Teruya-Feldstein, Robert A Weinberg
    posted to twist tumor mir-10b microrna by maralena on 2008-05-16 08:51:32 as ** along with 3 people and 1 group jfr ealloza heliopais microRNA
  • Putative promoter regions of miRNA genes involved in evolutionarily conserved regulatory systems among vertebrates.
    Bioinformatics (30 November 2007)
    by Shuji Fujita, Hideo Iba
    posted to vertebrates promoter microrna evolution conservation by maralena on 2008-05-15 14:41:20 as ** along with 2 people bootsy cabbagezs
  • MicroRNAs and Immunity: Tiny Players in a Big Field.
    Immunity, Vol. 26 (23 February 2007), pp. 133-137.
    by KD Taganov, MP Bolding, D Baltimore
    posted to mir-155 mir-146 mir-132 microrna immunity by maralena on 2008-05-15 12:28:48 as **
  • Regulation of the germinal center response by microRNA-155.
    Science, Vol. 316, No. 5824. (27 April 2007), pp. 604-608.
    by TH Thai, DP Calado, S Casola, KM Ansel, C Xiao, Y Xue, A Murphy, D Frendewey, D Valenzuela, JL Kutok, M Schmidt-Supprian, N Rajewsky, G Yancopoulos, A Rao, K Rajewsky
    posted to regulation mir-155 microrna bic by maralena on 2008-05-15 12:22:33 as ** along with 1 person and 1 group andersbj microRNA
  • Regulation of pri-microRNA BIC transcription and processing in Burkitt lymphoma
    Oncogene, Vol. aop, No. current.
    by J Kluiver, A van den Berg, D de Jong, T Blokzijl, G Harms, E Bouwman, S Jacobs, S Poppema, BJ Kroesen,
    posted to regulation mir-155 microrna lymphoma bic by maralena on 2008-05-15 12:19:06 as **
  • Systematic Identification of mRNAs Recruited to Argonaute 2 by Specific microRNAs and Corresponding Changes in Transcript Abundance.
    PLoS ONE, Vol. 3, No. 5. (2008)
    by DG Hendrickson, DJ Hogan, D Herschlag, JE Ferrell, PO Brown
    posted to transcript microrna argonaute by maralena on 2008-05-15 11:56:44 as ** along with 2 people bootsy yuwang
  • B-cell receptor activation induces BIC/miR-155 expression through a conserved AP-1 element.
    The Journal of biological chemistry, Vol. 283, No. 5. (1 February 2008), pp. 2654-2662.
    by Q Yin, X Wang, J McBride, C Fewell, E Flemington
    posted to mir-155 microrna bic b-cell ap-1 by maralena on 2008-05-15 10:31:55 as ** along with 1 person sandrapineau
  • Micromanagement during the innate immune response.
    Science's STKE : signal transduction knowledge environment, Vol. 2007, No. 387. (22 May 2007)
    by JE Dahlberg, E Lund
    posted to response mir-155 microrna immune by maralena on 2008-05-15 10:29:00 as **
  • A microRNA mediates EGF receptor signaling and promotes photoreceptor differentiation in the Drosophila eye.
    Cell, Vol. 123, No. 7. (29 December 2005), pp. 1267-1277.
    by X Li, RW Carthew
    posted to yan mir-7 microrna egf drosophila by maralena on 2008-05-15 09:45:06 as ** along with 2 people mtagaya skoch
  • A novel C. elegans zinc finger transcription factor, lsy-2, required for the cell type-specific expression of the lsy-6 microRNA.
    Development (16 November 2005)
    by Robert J J Johnston Jr, Oliver Hobert
    posted to tf microrna lsy-6 lsy-2 celegans by maralena on 2008-05-15 08:08:59 as ** along with 1 person and 1 group mortenlindow microRNA
  • MicroRNAs act sequentially and asymmetrically to control chemosensory laterality in the nematode
    Nature, Vol. 430, No. 7001. (2004), pp. 785-789.
    by Sarah Chang, Robert J Johnston, Christian Frokjaer-Jensen, Shawn Lockery, Oliver Hobert
    posted to microrna lsy-6 die-1 celegans by maralena on 2008-05-15 08:07:41 as ** along with 1 person mtagaya
  • microRNA miR-14 acts to modulate a positive autoregulatory loop controlling steroid hormone signaling in Drosophila
    Genes Dev., Vol. 21, No. 18. (15 September 2007), pp. 2277-2282.
    by Jishy Varghese, Stephen M Cohen
    posted to mir-14 microrna loop drosophila autoregulation by maralena on 2008-05-14 16:52:38 as **
  • Control of stress-dependent cardiac growth and gene expression by a MicroRNA.
    Science, Vol. 316, No. 5824. (27 April 2007), pp. 575-579.
    by E van Rooij, LB Sutherland, X Qi, JA Richardson, J Hill, EN Olson
    posted to regulation mir-208 microrna cardiac by maralena on 2008-05-14 16:37:08 as ** along with 5 people and 1 group tardigrade balicea andersbj mtagaya delenca microRNA
  • MicroRNA control of Nodal signalling
    Nature (29 August 2007)
    by Graziano Martello, Luca Zacchigna, Masafumi Inui, Marco Montagner, Maddalena Adorno, Anant Mamidi, Leonardo Morsut, Sandra Soligo, Uyen Tran, Sirio Dupont, Michelangelo Cordenonsi, Oliver Wessely, Stefano Piccolo
    posted to wnt signalling nodal mir-16 mir-15 microrna beta_catenin acvr2a by maralena on 2008-05-14 16:12:48 as ** along with 3 people and 1 group andersbj blobbybirdman ale microRNA
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