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jjray's bacteria [57 articles]

当前文献位于 jjray's 文献库 标签分类为 bacteria. You can also see everyone's bacteria.
  • Lipid Localization in Bacterial Cells through Curvature-Mediated Microphase Separation
    Biophys. J., Vol. 95, No. 3. (1 August 2008), pp. 1034-1049.
    by Ranjan Mukhopadhyay, Kerwyn C Huang, Ned S Wingreen
    posted to sporulation lipid_domain e_coli biophysics bacteria bacillus_subtilis by jjray on 2008-07-21 22:58:35 as **
  • Dynamics of Genome Rearrangement in Bacterial Populations
    PLoS Genet, Vol. 4, No. 7. (18 July 2008), e1000128.
    by Aaron E Darling, István Miklós, Mark A Ragan
    posted to phylogeny evolution chromosome_organization bayesian_inference bacteria by jjray on 2008-07-21 17:29:11 as ** along with 2 people djkt Ema
  • Autoamplification of a two-component regulatory system results in "learning" behavior.
    Journal of bacteriology, Vol. 183, No. 16. (August 2001), pp. 4914-4917.
    by SM Hoffer, HV Westerhoff, KJ Hellingwerf, PW Postma, J Tommassen
    posted to two-component_system gene_regulation feedback bacteria by jjray on 2008-07-13 19:31:16 as read
  • Making informed decisions: regulatory interactions between two-component systems.
    Trends in microbiology, Vol. 11, No. 8. (August 2003), pp. 359-366.
    by JJ Bijlsma, EA Groisman
    posted to two-component_system gene_regulation bacteria by jjray on 2008-07-13 19:30:06 as read
  • Functional organisation of Escherichia coli transcriptional regulatory network
    Journal of Molecular Biology, Vol. 381, No. 1. (1 August 2008), pp. 238-247.
    by Agustino Martínez-Antonio, Sarath C Janga, Denis Thieffry
    posted to transcriptional_regulation positive_feedback global_regulator feedback e_coli bacteria by jjray on 2008-07-11 17:13:23 as ** along with 1 person maralena
  • A Bacterial Cell-Cycle Regulatory Network Operating in Time and Space
    Science, Vol. 301, No. 5641. (26 September 2003), pp. 1874-1877.
    by Harley H Mcadams, Lucy Shapiro
    posted to transcriptional_regulation network mathematical_model just-in-time bacteria by jjray on 2008-07-10 18:23:52 as ** along with 6 people and 1 group balajis nickluscombe comb lshaw fishtank dylan77 EBI-regulation
  • Mechanism of the PII-activated phosphatase activity of Escherichia coli NRII (NtrB): how the different domains of NRII collaborate to act as a phosphatase.
    Biochemistry, Vol. 42, No. 29. (29 July 2003), pp. 8885-8899.
    by AA Pioszak, AJ Ninfa
    posted to two-component_system quantitative_data phosphorylation bacteria by jjray on 2008-06-23 21:45:32 as read
  • Functional dissection of the dimerization and enzymatic activities of Escherichia coli nitrogen regulator II and their regulation by the PII protein.
    Biochemistry, Vol. 39, No. 44. (7 November 2000), pp. 13433-13449.
    by P Jiang, MR Atkinson, C Srisawat, Q Sun, AJ Ninfa
    posted to two-component_system quantitative_data phosphorylation bacteria by jjray on 2008-06-23 21:45:24 as read
  • Asymmetry in the autophosphorylation of the two-component regulatory system transmitter protein nitrogen regulator II of Escherichia coli.
    Biochemistry, Vol. 39, No. 17. (2 May 2000), pp. 5057-5065.
    by P Jiang, JA Peliska, AJ Ninfa
    posted to two-component_system quantitative_data phosphorylation bacteria by jjray on 2008-06-23 21:44:21 as read
  • Phosphorylation alters the interaction of the response regulator OmpR with its sensor kinase EnvZ.
    The Journal of biological chemistry, Vol. 277, No. 13. (29 March 2002), pp. 11143-11148.
    by K Mattison, LJ Kenney
    posted to two-component_system quantitative_data binding_constant bacteria by jjray on 2008-06-23 20:21:53 as read
  • Central role of the BvgS receiver as a phosphorylated intermediate in a complex two-component phosphorelay.
    The Journal of biological chemistry, Vol. 271, No. 52. (27 December 1996), pp. 33176-33180.
    by MA Uhl, JF Miller
    posted to two-component_system quantitative_data phosphorylation kinetics bacteria by jjray on 2008-06-23 20:10:40 as read
  • Kinetic comparison of the specificity of the vancomycin resistance VanSfor two response regulators, VanR and PhoB.
    Biochemistry, Vol. 35, No. 15. (16 April 1996), pp. 4732-4740.
    by SL Fisher, SK Kim, BL Wanner, CT Walsh
    posted to two-component_system quantitative_data parameter kinetics bacteria by jjray on 2008-06-23 20:06:29 as read
  • Crosstalk between bacterial chemotaxis signal transduction proteins and regulators of transcription of the Ntr regulon: evidence that nitrogen assimilation and chemotaxis are controlled by a common phosphotransfer mechanism.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 85, No. 15. (August 1988), pp. 5492-5496.
    by AJ Ninfa, EG Ninfa, AN Lupas, A Stock, B Magasanik, J Stock
    posted to two-component_system transcriptional_regulation phosphorylation crosstalk chemotaxis bacteria by jjray on 2008-06-23 20:02:54 as read
  • Purification and characterization of VanR and the cytosolic domain of VanS: a two-component regulatory system required for vancomycin resistance in Enterococcus faecium BM4147.
    Biochemistry, Vol. 32, No. 19. (18 May 1993), pp. 5057-5063.
    by GD Wright, TR Holman, CT Walsh
    posted to two-component_system quantitative_data bacteria by jjray on 2008-06-23 18:58:53 as read
  • Selection of lac gene fusions in vivo: ompR-lacZ fusions that define a functional domain of the ompR gene product.
    J. Bacteriol., Vol. 159, No. 2. (1 August 1984), pp. 750-756.
    by ML Berman, DE Jackson
    posted to two-component_system translation salmonella operon bacteria by jjray on 2008-06-23 15:22:53 as read
  • Interaction of EnvZ, a sensory histidine kinase, with phosphorylated OmpR, the cognate response regulator
    Molecular Microbiology, Vol. 46, No. 5. (2002), pp. 1283-1294.
    by Takeshi Yoshida, Sheng J Cai, Masayori Inouye
    posted to two-component_system protein_binding bacteria by jjray on 2008-06-20 23:07:24 as read
  • EnvZ-OmpR Interaction and Osmoregulation in Escherichia coli
    J. Biol. Chem., Vol. 277, No. 27. (28 June 2002), pp. 24155-24161.
    by Sheng J Cai, Masayori Inouye
    posted to two-component_system quantitative_data parameter e_coli binding_constant bacteria by jjray on 2008-06-20 22:47:40 as read
  • Signal-dependent Binding of the Response Regulators PhoP and PmrA to Their Target Promoters in Vivo
    J. Biol. Chem., Vol. 280, No. 6. (11 February 2005), pp. 4089-4094.
    by Dongwoo Shin, Eduardo A Groisman
    posted to two-component_system signaling phosphorylation gene_regulation bacteria by jjray on 2008-06-20 20:19:28 as read
  • Switched or not?: the structure of unphosphorylated CheY bound to the N terminus of FliM.
    Journal of bacteriology, Vol. 188, No. 21. (November 2006), pp. 7354-7363.
    by CM Dyer, FW Dahlquist
    posted to two-component_system chemotaxis bacteria by jjray on 2008-06-11 21:52:05 as **
  • Bacterial response regulators: versatile regulatory strategies from common domains
    Trends in Biochemical Sciences, Vol. 32, No. 5. (May 2007), pp. 225-234.
    by Rong Gao, Timothy R Mack, Ann M Stock
    posted to two-component_system review bacteria 3-dimensional_structure by jjray on 2008-06-11 21:11:20 as read along with 2 people and 1 group blobbybirdman kroos Myxo group
  • Crystal Structures of the Receiver Domain of the Response Regulator PhoP from Escherichia coli in the Absence and Presence of the Phosphoryl Analog Beryllofluoride
    J. Bacteriol., Vol. 189, No. 16. (15 August 2007), pp. 5987-5995.
    by Priti Bachhawat, Ann M Stock
    posted to two-component_system signaling e_coli bacteria 3-dimensional_structure by jjray on 2008-06-11 18:16:30 as read
  • Anticipatory Behavior Within Microbial Genetic Networks
    Science (8 May 2008), 1154456.
    by Ilias Tagkopoulos, Yir-Chung Liu, Saeed Tavazoie
    posted to simulation network evolution e_coli bacteria by jjray on 2008-06-10 22:37:00 as read along with 7 people and 2 groups stringertheory dbikard deanmalmgren djkt skumagai roys brembs Centre de Recherches Interdisciplinaires Bacterial Genome Plasticity
  • Kinetic Partitioning Between Alternative Protein-Protein Interactions Controls a Transcriptional Switch
    Journal of Molecular Biology, Vol. 380, No. 1. (27 June 2008), pp. 223-236.
    by Huaying Zhao, Dorothy Beckett
    posted to transcriptional_regulation kinetics e_coli biophysics bacteria by jjray on 2008-06-10 21:44:42 as **
  • A Positive Feedback Loop Promotes Transcription Surge That Jump-Starts Salmonella Virulence Circuit
    Science, Vol. 314, No. 5805. (8 December 2006), pp. 1607-1609.
    by Dongwoo Shin, Eun-Jin Lee, Henry Huang, Eduardo A Groisman
    posted to two-component_system gene_regulation gene_expression feedback bacteria by jjray on 2008-05-26 16:27:20 as read
  • PLEIOTROPIC EFFECTS OF BENEFICIAL MUTATIONS IN ESCHERICHIA COLI
    Evolution, Vol. 59, No. 11. (2005), pp. 2343-2352.
    by Elizabeth A Ostrowski, Daniel E Rozen, Richard E Lenski
    posted to pleiotropy evolution e_coli bacteria by jjray on 2008-05-22 16:52:43 as **
  • Stochastic Receptor Expression Allows Sensitive Bacteria to Evade Phage Attack. Part II: Theoretical Analyses
    Biophys. J., Vol. 94, No. 11. (1 June 2008), pp. 4537-4548.
    by E Chapman-Mcquiston, XL Wu
    posted to stochastic receptor phenotypic_heterogeneity persister e_coli bacteria by jjray on 2008-05-14 22:45:00 as ** along with 1 person madhadron
  • Stochastic Receptor Expression Allows Sensitive Bacteria to Evade Phage Attack. Part I: Experiments
    Biophys. J., Vol. 94, No. 11. (1 June 2008), pp. 4525-4536.
    by E Chapman-Mcquiston, XL Wu
    posted to stochastic receptor phenotypic_heterogeneity persister e_coli bacteria by jjray on 2008-05-14 22:44:46 as ** along with 1 person madhadron
  • The evolution of modularity in bacterial metabolic networks
    Proceedings of the National Academy of Sciences (6 May 2008), 0712149105.
    by Anat Kreimer, Elhanan Borenstein, Uri Gophna, Eytan Ruppin
    posted to network modularity metabolism bacteria by jjray on 2008-05-13 15:24:23 as ** along with 11 people carlk mjoach saket qwermish deanmalmgren tmmurali skato_toyaku hryk pinney roys phoenixzxl
  • Single-cell protein induction dynamics reveals a period of vulnerability to antibiotics in persister bacteria
    Proceedings of the National Academy of Sciences (21 April 2008), 0711712105.
    by Orit Gefen, Chana Gabay, Michael Mumcuoglu, Giora Engel, Nathalie Q Balaban
    posted to persister noise gene_expression e_coli bacteria by jjray on 2008-04-22 18:47:40 as ** along with 1 person madhadron
  • Hysteretic and graded responses in bacterial two-component signal transduction.
    Molecular microbiology (8 April 2008)
    by Oleg A Igoshin, Rui Alves, Michael A Savageau
    posted to bacteria bistability mathematical_model two-component_system by jjray on 2008-04-16 19:32:03 as read
  • Establishment of an mRNA gradient depends on the promoter: an investigation of polarity in gene expression.
    Journal of molecular biology, Vol. 378, No. 2. (25 April 2008), pp. 318-327.
    by HJ Lee, HJ Jeon, SC Ji, SH Yun, HM Lim
    posted to bacteria gene_expression gene_order gradient mrna operon promoter by jjray on 2008-04-14 17:40:02 as read
  • Continuous control in bacterial regulatory circuits.
    J Bacteriol, Vol. 186, No. 22. (November 2004), pp. 7618-7625.
    by E Batchelor, TJ Silhavy, M Goulian
    posted to bacteria feedback gene_regulation by jjray on 2008-03-28 17:15:33 as **
  • Ab initio thermodynamic modeling of distal multisite transcription regulation.
    Nucleic Acids Res, Vol. 36, No. 3. (February 2008), pp. 726-731.
    by L Saiz, JM Vilar
    posted to transcriptional_regulation transcription thermodynamics mathematical_model biophysics bacteria by jjray on 2008-03-14 17:29:29 as read along with 1 person maximilianh
  • The bacterial adaptive response gene, barA, encodes a novel conserved histidine kinase regulatory switch for adaptation and modulation of metabolism in Escherichia coli
    Molecular and Cellular Biochemistry, Vol. 253, No. 1. (1 November 2003), pp. 167-177.
    by Surasri N Sahu, Sharmistha Acharya, Helina Tuminaro, Isha Patel, Kim Dudley, Eugene J Leclerc, Thomas A Cebula, Suman Mukhopadhyay
    posted to bacteria bara e_coli metabolism signaling two-component_system by jjray on 2008-02-18 19:44:04 as ** along with 1 person srfairclough
  • Pathways leading from BarA/SirA to motility and virulence gene expression in Salmonella.
    J Bacteriol, Vol. 185, No. 24. (December 2003), pp. 7257-7265.
    by M Teplitski, RI Goodier, BM Ahmer
    posted to bacteria bara two-component_system by jjray on 2008-02-18 18:06:21 as read along with 1 person hannahrajasingh
  • Instability of sensory histidine kinase mRNAs in Escherichia coli.
    Genes Cells, Vol. 8, No. 2. (February 2003), pp. 179-187.
    by T Aiso, R Ohki
    posted to bacteria e_coli mrna two-component_system by jjray on 2008-02-18 18:04:06 as read
  • Phosphotransfer circuitry of the putative multi-signal transducer, ArcB, of Escherichia coli: in vitro studies with mutants.
    Mol Microbiol, Vol. 18, No. 5. (December 1995), pp. 953-962.
    by M Tsuzuki, K Ishige, T Mizuno
    posted to bacteria e_coli signaling two-component_system by jjray on 2008-02-18 18:01:49 as **
  • A novel device of bacterial signal transducers.
    EMBO J, Vol. 13, No. 21. (1 November 1994), pp. 5195-5202.
    by K Ishige, S Nagasawa, S Tokishita, T Mizuno
    posted to bacteria bara e_coli signaling two-component_system by jjray on 2008-02-18 18:00:42 as read
  • A novel sensor-regulator protein that belongs to the homologous family of signal-transduction proteins involved in adaptive responses in Escherichia coli.
    Mol Microbiol, Vol. 6, No. 6. (March 1992), pp. 799-807.
    by S Nagasawa, S Tokishita, H Aiba, T Mizuno
    posted to bacteria bara e_coli two-component_system by jjray on 2008-02-18 17:59:02 as **
  • Transcriptional induction of the conserved alternative sigma factor RpoS in Escherichia coli is dependent on BarA, a probable two-component regulator.
    Mol Microbiol, Vol. 37, No. 2. (July 2000), pp. 371-381.
    by S Mukhopadhyay, JP Audia, RN Roy, HE Schellhorn
    posted to bacteria bara csra e_coli sigma_factor two-component_system by jjray on 2008-02-18 17:56:09 as read
  • The bacterial adaptive response gene, barA, encodes a novel conserved histidine kinase regulatory switch for adaptation and modulation of metabolism in Escherichia coli.
    Mol Cell Biochem, Vol. 253, No. 1-2. (November 2003), pp. 167-177.
    by SN Sahu, S Acharya, H Tuminaro, I Patel, K Dudley, JE LeClerc, TA Cebula, S Mukhopadhyay
    posted to bacteria bara csra e_coli two-component_system by jjray on 2008-02-18 17:53:57 as **
  • Control of rpoS transcription in Escherichia coli and Pseudomonas: why so different?
    Mol Microbiol, Vol. 49, No. 1. (July 2003), pp. 1-9.
    by V Venturi
    posted to bacteria bara e_coli sigma_factor transcription by jjray on 2008-02-18 17:53:09 as read
  • The Escherichia coli BarA-UvrY two-component system is a virulence determinant in the urinary tract.
    BMC Microbiol, Vol. 6 (2006)
    by H Tomenius, AK Pernestig, K Jonas, D Georgellis, R Möllby, S Normark, O Melefors
    posted to bacteria bara csra e_coli two-component_system by jjray on 2008-02-18 17:50:26 as read
  • The BarA-UvrY two-component system regulates virulence in avian pathogenic Escherichia coli O78:K80:H9.
    Infect Immun, Vol. 74, No. 8. (August 2006), pp. 4900-4909.
    by CD Herren, A Mitra, SK Palaniyandi, A Coleman, S Elankumaran, S Mukhopadhyay
    posted to bacteria bara csra e_coli two-component_system by jjray on 2008-02-18 17:49:58 as read
  • Robustness and the cycle of phosphorylation and dephosphorylation in a two-component regulatory system
    Proceedings of the National Academy of Sciences, Vol. 100, No. 2. (21 January 2003), pp. 691-696.
    by Eric Batchelor, Mark Goulian
    posted to bacteria biochemistry mathematical_model robustness two-component_system by jjray on 2008-02-13 23:17:21 as read
  • EnvZ controls the concentration of phosphorylated OmpR to mediate osmoregulation of the porin genes
    Journal of Molecular Biology, Vol. 222, No. 3. (5 December 1991), pp. 567-580.
    by Frank D Russo, Thomas J Silhavy
    posted to bacteria biochemistry two-component_system by jjray on 2008-02-13 23:16:37 as **
  • The essential tension: opposed reactions in bacterial two-component regulatory systems
    Trends in Microbiology, Vol. 1, No. 8. (November 1993), pp. 306-310.
    by Frank D Russo, Thomas J Silhavy
    posted to bacteria biochemistry two-component_system by jjray on 2008-02-13 23:16:10 as **
  • MtrAB-LpqB: a conserved three-component system in actinobacteria?
    Trends in Microbiology, Vol. 14, No. 10. (October 2006), pp. 444-449.
    by Paul A Hoskisson, Matthew I Hutchings
    posted to bacteria review two-component_system by jjray on 2008-02-11 20:23:11 as **
  • Genetic and Biochemical Studies of Phosphatase Activity of PhoR
    J. Bacteriol., Vol. 185, No. 3. (1 February 2003), pp. 1112-1115.
    by Daniel O Carmany, Kristine Hollingsworth, William R Mccleary
    posted to bacteria e_coli two-component_system by jjray on 2008-02-11 18:16:38 as **
  • Specificity in two-component signal transduction pathways.
    Annu Rev Genet, Vol. 41 (2007), pp. 121-145.
    by MT Laub, M Goulian
    posted to bacteria review signaling signal_specificity two-component_system by jjray on 2008-02-11 17:52:50 as **
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