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elfar's Zhang [22 articles]

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  • Genome-wide analysis for discovery of rice microRNAs reveals natural antisense microRNAs (nat-miRNAs).
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 105, No. 12. (25 March 2008), pp. 4951-4956.
    by C Lu, DH Jeong, K Kulkarni, M Pillay, K Nobuta, R German, SR Thatcher, C Maher, L Zhang, D Ware, B Liu, X Cao, BC Meyers, PJ Green
    posted to antisense mirna by elfar on 2008-05-08 15:18:04 as ** along with 1 person tolot27
  • MicroRNA: a new player in stem cells.
    Journal of cellular physiology, Vol. 209, No. 2. (November 2006), pp. 266-269.
    by B Zhang, X Pan, TA Anderson
    posted to microrna by elfar on 2008-04-23 14:04:39 as **
  • NATsDB: Natural Antisense Transcripts DataBase.
    Nucleic Acids Res. (2006)
    by Y Zhang, J Li, L Kong, G Gao, QR Liu, L Wei
    posted to bibtex-import by elfar on 2008-04-09 15:33:44 as **
  • A sequence-based filtering method for ncRNA identification and its application to searching for riboswitch elements.
    Bioinformatics., Vol. 22, No. 14. (2006), pp. e557-65.
    by S Zhang, I Borovok, Y Aharonowitz, R Sharan, V Bafna
    posted to bibtex-import by elfar on 2008-04-09 15:33:43 as **
  • Alignment of BLAST high-scoring segment pairs based on the longest increasing subsequence algorithm.
    Bioinformatics., Vol. 19, No. 11. (2003), pp. 1391-6.
    by H Zhang
    posted to bibtex-import by elfar on 2008-04-09 15:33:43 as **
  • Human RNase 7: a new cationic ribonuclease of the RNase A superfamily.
    Nucleic Acids Res, Vol. 31, No. 2. (2003), pp. 602-7.
    by J Zhang, KD Dyer, HF Rosenberg
    posted to bibtex-import by elfar on 2008-04-09 15:33:43 as **
  • Simple fast algorithms for the editing distance between trees and related problems
    SIAM Journal of Computing, Vol. 18, No. 6. (1989), pp. 1245-1262.
    by K Zhang, D Shasha
    posted to bibtex-import by elfar on 2008-04-09 15:33:43 as **
  • Small RNAs in Escherichia coli.
    Trends Microbiol, Vol. 7, No. 1. (1999), pp. 37-45.
    by KM Wassarman, A Zhang, G Storz
    posted to bibtex-import by elfar on 2008-04-09 15:33:43 as **
  • Small RNAs in Escherichia coli.
    Trends Microbiol, Vol. 7, No. 1. (1999), pp. 37-45.
    by KM Wassarman, A Zhang, G Storz
    posted to bibtex-import by elfar on 2008-04-09 15:33:43 as **
  • MicroRNA identification based on sequence and structure alignment
    Bioinformatics, Vol. 21, No. 18. (2005), pp. 3610-3614.
    by Xiaowo Wang, Jing Zhang, Fei Li, Jin Gu, Tao He, Xuegong Zhang, Yanda Li
    posted to bibtex-import by elfar on 2008-04-09 15:33:42 as **
  • Comparative analyses of multi-species sequences from targeted genomic regions.
    Nature., Vol. 424, No. 6950. (2003), pp. 788-93.
    by JW Thomas, JW Touchman, RW Blakesley, GG Bouffard, Beckstrom SM Sternberg, EH Margulies, M Blanchette, AC Siepel, PJ Thomas, JC Mcdowell, B Maskeri, NF Hansen, MS Schwartz, RJ Weber, WJ Kent, D Karolchik, TC Bruen, R Bevan, DJ Cutler, S Schwartz, L Elnitski, JR Idol, AB Prasad, Lee SQ Lin, VV Maduro, TJ Summers, ME Portnoy, NL Dietrich, N Akhter, K Ayele, B Benjamin, K Cariaga, CP Brinkley, SY Brooks, S Granite, X Guan, J Gupta, P Haghighi, SL Ho, MC Huang, E Karlins, PL Laric, R Legaspi, MJ Lim, QL Maduro, CA Masiello, SD Mastrian, JC Mccloskey, R Pearson, S Stantripop, EE Tiongson, JT Tran, C Tsurgeon, JL Vogt, MA Walker, KD Wetherby, LS Wiggins, AC Young, LH Zhang, K Osoegawa, B Zhu, B Zhao, CL Shu, PJ De Jong, CE Lawrence, AF Smit, A Chakravarti, D Haussler, P Green, W Miller, ED Green
    posted to bibtex-import by elfar on 2008-04-09 15:33:41 as **
  • Comparing multiple RNA secondary structures using tree comparisons
    CABIOS, Vol. 6 (1990), pp. 309-318.
    by B Shapiro, K Zhang
    posted to bibtex-import by elfar on 2008-04-09 15:33:40 as **
  • ILM: A web server for predicting RNA secondary structures with pseudoknots
    Nucleic Acids Research, Vol. 32 (2004), pp. 146-149.
    by Jianhua Ruan, Gary D Stormo, Weixiong Zhang
    posted to bibtex-import by elfar on 2008-04-09 15:33:39 as **
  • An iterated loop matching approach to the prediction of RNA secondary structures with pseudoknots
    Bioinformatics, Vol. 20, No. 1. (2004), pp. 58-66.
    by Jianhua Ruan, Gary D Stormo, Weixiong Zhang
    posted to bibtex-import by elfar on 2008-04-09 15:33:39 as **
  • An Iterated loop matching approach to the prediction of RNA secondary structures with pseudoknots.
    Bioinformatics., Vol. 20, No. 1. (2004), pp. 58-66.
    by J Ruan, GD Stormo, W Zhang
    posted to bibtex-import by elfar on 2008-04-09 15:33:39 as **
  • Human microRNA prediction through a probabilistic co-learning model of sequence and structure
    Nucleic Acids Research, Vol. 33, No. 11. (2005), pp. 3570-3581.
    by Jin W Nam, Ki R Shin, Jinju Han, Yoontae Lee, Narry V Kim, Byoung T Zhang
    posted to bibtex-import by elfar on 2008-04-09 15:33:36 as **
  • NONCODE: an integrated knowledge database of non-coding RNAs.
    Nucleic Acids Res., Vol. 33, No. Database issue. (2005), pp. D112-5.
    by C Liu, B Bai, G Skogerbo, L Cai, W Deng, Y Zhang, D Bu, Y Zhao, R Chen
    posted to bibtex-import by elfar on 2008-04-09 15:33:34 as **
  • A novel gene organization: intronic snoRNA gene clusters from Oryza sativa.
    Nucleic Acids Res, Vol. 30, No. 14. (2002), pp. 3262-72.
    by D Liang, H Zhou, P Zhang, YQ Chen, X Chen, CL Chen, LH Qu
    posted to bibtex-import by elfar on 2008-04-09 15:33:33 as **
  • Profiling Caenorhabditis elegans non-coding RNA expression with a combined microarray.
    Nucleic Acids Res., Vol. 34, No. 10. (2006), pp. 2976-83.
    by H He, L Cai, G Skogerbo, W Deng, T Liu, X Zhu, Y Wang, D Jia, Z Zhang, Y Tao, H Zeng, MN Aftab, Y Cui, G Liu, R Chen
    posted to bibtex-import by elfar on 2008-04-09 15:33:29 as **
  • FastR: fast database search tool for non-coding RNA.
    Proc IEEE Comput Syst Bioinform Conf. (2004), pp. 52-61.
    by V Bafna, S Zhang
    posted to bibtex-import by elfar on 2008-04-09 15:33:21 as **
  • A small, stable RNA induced by oxidative stress: role as a pleiotropic regulator and antimutator.
    Cell, Vol. 90, No. 1. (1997), pp. 43-53.
    by S Altuvia, Weinstein D Fischer, A Zhang, L Postow, G Storz
    posted to bibtex-import by elfar on 2008-04-09 15:33:21 as **
  • Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
    Nucleic Acids Res., Vol. 25, No. 17. (1997), pp. 3389-402.
    by SF Altschul, TL Madden, AA Schaffer, J Zhang, Z Zhang, W Miller, DJ Lipman
    posted to bibtex-import by elfar on 2008-04-09 15:33:21 as **
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