注册 | 登录 | FAQ      [?] 
Recent | Unread | Search | Authors | Tags | Export

elfar's library [478 articles]

最近录入 elfar's 文献库.
  • Genome-wide analysis for discovery of rice microRNAs reveals natural antisense microRNAs (nat-miRNAs).
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 105, No. 12. (25 March 2008), pp. 4951-4956.
    by C Lu, DH Jeong, K Kulkarni, M Pillay, K Nobuta, R German, SR Thatcher, C Maher, L Zhang, D Ware, B Liu, X Cao, BC Meyers, PJ Green
    posted to mirna antisense by elfar on 2008-05-08 15:18:04 as **
  • Sorting out small RNAs.
    Cell, Vol. 133, No. 1. (4 April 2008), pp. 25-26.
    by VN Kim
    posted to mirna by elfar on 2008-05-08 15:15:59 as **
  • The Vienna RNA Websuite.
    Nucleic acids research (19 April 2008)
    by Andreas R R Gruber, Ronny Lorenz, Stephan H H Bernhart, Richard Neuböck, Ivo L L Hofacker
    posted to webserver vienna by elfar on 2008-05-08 15:14:59 as ** along with 1 person austin
  • RNAplex: a fast tool for RNA-RNA interaction search.
    Bioinformatics (Oxford, England) (23 April 2008)
    by Hakim Tafer, Ivo L L Hofacker
    posted to rna-rna interaction by elfar on 2008-05-08 15:08:57 as **
  • Human Alu RNA Is a Modular Transacting Repressor of mRNA Transcription during Heat Shock.
    Mol Cell, Vol. 29, No. 4. (29 February 2008), pp. 499-509.
    by PD Mariner, RD Walters, CA Espinoza, LF Drullinger, SD Wagner, JF Kugel, JA Goodrich
    posted to rna alu by elfar on 2008-05-08 15:07:22 as ** along with 1 person stoffreg
  • The regulatory activity of microRNA(*) species has substantial influence on microRNA and 3' UTR evolution.
    Nature structural & molecular biology (30 March 2008)
    by Katsutomo Okamura, Michael D D Phillips, David M M Tyler, Hong Duan, Yu-Ting T Chou, Eric C C Lai
    posted to mirna by elfar on 2008-05-08 15:01:45 as ** along with 4 people and 1 group heliopais cabbagezs maralena mdphillips microRNA
  • Improved accuracy of multiple ncRNA alignment by incorporating structural information into a MAFFT-based framework
    BMC Bioinformatics, Vol. 9 (25 April 2008), 212.
    by Kazutaka Katoh, Hiroyuki Toh
    posted to multiple alignment by elfar on 2008-05-08 14:57:37 as **
  • ConStruct: improved construction of RNA consensus structures
    BMC Bioinformatics, Vol. 9 (28 April 2008), 219.
    by Andreas Wilm, Kornelia Linnenbrink, Gerhard Steger
    posted to multiple alignment by elfar on 2008-05-08 14:43:52 as **
  • R: A Language for Data Analysis and Graphics
    Journal of Computational and Graphical Statistics, Vol. 5, No. 3. (1996), pp. 299-314.
    by Ross Ihaka, Robert Gentleman
    posted to file-import-08-04-28 by elfar on 2008-04-28 11:13:11 as **
  • Three models for the description of language.
    IRE Transactions on Information Theory, Vol. 2 (1956), pp. 113-124.
    by N Chomsky
    posted to file-import-08-04-28 by elfar on 2008-04-28 10:14:26 as **
  • Some molecular details of the secondary structure of ribonucleic acid.
    Nature, Vol. 188 (8 October 1960), pp. 98-101.
    by JR FRESCO, BM ALBERTS, P DOTY
    posted to no-tag by elfar on 2008-04-28 10:04:14 as **
  • Genome scale search of noncoding RNAs Bacteria to Vertebrates
    (2008)
    by Zizhen Yao
    posted to no-tag by elfar on 2008-04-24 12:40:11 as **
  • Dual coding of siRNAs and miRNAs by plant transposable elements
    RNA (26 March 2008), rna.916708.
    by Jittima Piriyapongsa, King I Jordan
    posted to palindrome microrna by elfar on 2008-04-23 17:48:25 as **
  • Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets.
    Cell, Vol. 120, No. 1. (14 January 2005), pp. 15-20.
    by BP Lewis, CB Burge, DP Bartel
    posted to microrna by elfar on 2008-04-23 14:06:12 as ** along with 9 people and 3 groups marcius maryee eckart_bindewald tardigrade mortenlindow andersbj mtagaya heliopais Alexander_Kanitz microRNA BioinfoCIPF SGU-CIPF
  • MicroRNA: a new player in stem cells.
    Journal of cellular physiology, Vol. 209, No. 2. (November 2006), pp. 266-269.
    by B Zhang, X Pan, TA Anderson
    posted to microrna by elfar on 2008-04-23 14:04:39 as **
  • MicroRNAs, mRNAs, and Translation.
    Cold Spring Harb Symp Quant Biol, Vol. 71 (2006), pp. 531-535.
    by PA Maroney, Y Yu, TW Nilsen
    posted to microrna by elfar on 2008-04-23 14:03:03 as ** along with 1 person tardigrade
  • microRNAs: small molecules with big roles - C. elegans to human cancer.
    Biology of the cell / under the auspices of the European Cell Biology Organization, Vol. 100, No. 2. (February 2008), pp. 71-81.
    by M Kato, FJ Slack
    posted to microrna by elfar on 2008-04-23 14:01:48 as **
  • Short RNAs can identify new candidate transposable element families in Arabidopsis.
    Plant Physiol, Vol. 130, No. 1. (September 2002), pp. 6-9.
    by MF Mette, J van der Winden, M Matzke, AJ Matzke
    posted to palindrome by elfar on 2008-04-23 13:20:17 as ** along with 2 people mtagaya dandaman
  • A Family of Human MicroRNA Genes from Miniature Inverted-Repeat Transposable Elements
    PLoS ONE, Vol. 2, No. 2. (2007)
    by Jittima Piriyapongsa, King I Jordan
    posted to file-import-08-04-23 by elfar on 2008-04-23 11:20:36 as **
  • Initial sequencing and comparative analysis of the mouse genome.
    Nature, Vol. 420, No. 6915. (5 December 2002), pp. 520-562.
    by RH Waterston, K Lindblad-Toh, E Birney, J Rogers, JF Abril, P Agarwal, R Agarwala, R Ainscough, M Alexandersson, P An, SE Antonarakis, J Attwood, R Baertsch, J Bailey, K Barlow, S Beck, E Berry, B Birren, T Bloom, P Bork, M Botcherby, N Bray, MR Brent, DG Brown, SD Brown, C Bult, J Burton, J Butler, RD Campbell, P Carninci, S Cawley, F Chiaromonte, AT Chinwalla, DM Church, M Clamp, C Clee, FS Collins, LL Cook, RR Copley, A Coulson, O Couronne, J Cuff, V Curwen, T Cutts, M Daly, R David, J Davies, KD Delehaunty, J Deri, ET Dermitzakis, C Dewey, NJ Dickens, M Diekhans, S Dodge, I Dubchak, DM Dunn, SR Eddy, L Elnitski, RD Emes, P Eswara, E Eyras, A Felsenfeld, GA Fewell, P Flicek, K Foley, WN Frankel, LA Fulton, RS Fulton, TS Furey, D Gage, RA Gibbs, G Glusman, S Gnerre, N Goldman, L Goodstadt, D Grafham, TA Graves, ED Green, S Gregory, R Guigó, M Guyer, RC Hardison, D Haussler, Y Hayashizaki, LW Hillier, A Hinrichs, W Hlavina, T Holzer, F Hsu, A Hua, T Hubbard, A Hunt, I Jackson, DB Jaffe, LS Johnson, M Jones, TA Jones, A Joy, M Kamal, EK Karlsson, D Karolchik, A Kasprzyk, J Kawai, E Keibler, C Kells, WJ Kent, A Kirby, DL Kolbe, I Korf, RS Kucherlapati, EJ Kulbokas, D Kulp, T Landers, JP Leger, S Leonard, I Letunic, R Levine, J Li, M Li, C Lloyd, S Lucas, B Ma, DR Maglott, ER Mardis, L Matthews, E Mauceli, JH Mayer, M McCarthy, WR McCombie, S McLaren, K McLay, JD McPherson, J Meldrim, B Meredith, JP Mesirov, W Miller, TL Miner, E Mongin, KT Montgomery, M Morgan, R Mott, JC Mullikin, DM Muzny, WE Nash, JO Nelson, MN Nhan, R Nicol, Z Ning, C Nusbaum, MJ O'Connor, Y Okazaki, K Oliver, E Overton-Larty, L Pachter, G Parra, KH Pepin, J Peterson, P Pevzner, R Plumb, CS Pohl, A Poliakov, TC Ponce, CP Ponting, S Potter, M Quail, A Reymond, BA Roe, KM Roskin, EM Rubin, AG Rust, R Santos, V Sapojnikov, B Schultz, J Schultz, MS Schwartz, S Schwartz, C Scott, S Seaman, S Searle, T Sharpe, A Sheridan, R Shownkeen, S Sims, JB Singer, G Slater, A Smit, DR Smith, B Spencer, A Stabenau, N Stange-Thomann, C Sugnet, M Suyama, G Tesler, J Thompson, D Torrents, E Trevaskis, J Tromp, C Ucla, A Ureta-Vidal, JP Vinson, AC Von Niederhausern, CM Wade, M Wall, RJ Weber, RB Weiss, MC Wendl, AP West, K Wetterstrand, R Wheeler, S Whelan, J Wierzbowski, D Willey, S Williams, RK Wilson, E Winter, KC Worley, D Wyman, S Yang, SP Yang, EM Zdobnov, MC Zody, ES Lander,
    posted to no-tag by elfar on 2008-04-16 19:56:17 as ** along with 17 people and 2 groups OriginalLurch dkulp sdinka Cortel jwortman Dax42 aprasad ccots indigoviolet adepace treangen joshuashen djkt stajich olympos hausen yoanjacquemin EisenLab Berkeley Mycology
  • Functionality or transcriptional noise? Evidence for selection within long noncoding RNAs
    Genome Res., Vol. 17, No. 5. (1 May 2007), pp. 556-565.
    by Jasmina Ponjavic, Chris P Ponting, Gerton Lunter
    posted to long ncrna selection by elfar on 2008-04-16 19:54:38 as ** along with 5 people and 4 groups aprasad alexg dchughes djkt Stew Bioinformatics EisenLab G4ID Genetics-of-Gambling
  • Probabilistic whole-genome alignments reveal high indel rates in the human and mouse genomes.
    Bioinformatics, Vol. 23, No. 13. (1 July 2007)
    by G Lunter
    posted to no-tag by elfar on 2008-04-16 19:51:25 as ** along with 3 people and 1 group aprasad AaronDarling mailund Bioinformatics
  • Secondary structure prediction for aligned RNA sequences.
    J Mol Biol, Vol. 319, No. 5. (2002), pp. 1059-66.
    by Ivo L Hofacker, Martin Fekete, Peter F Stadler
    posted to file-import-08-04-16 by elfar on 2008-04-16 13:35:17 as **
  • The MC-Fold and MC-Sym pipeline infers RNA structure from sequence data
    Nature, Vol. 452, No. 7183., pp. 51-55.
    by Marc Parisien, François Major
    posted to no-tag by elfar on 2008-04-14 17:47:08 as ** along with 3 people reyez austin zwang
  • Fast Pairwise Structural RNA Alignments by Pruning of the Dynamical Programming Matrix.
    PLoS Comput Biol, Vol. 3, No. 10. (12 October 2007)
    by Jakob H H Havgaard, Elfar Torarinsson, Jan Gorodkin
    posted to no-tag by elfar on 2008-04-14 15:16:11 as ** along with 2 people mtagaya fabsta
  • RNA Maps Reveal New RNA Classes and a Possible Function for Pervasive Transcription
    Science (17 May 2007), 1138341.
    by Philipp Kapranov, Jill Cheng, Sujit Dike, David A Nix, Radharani Duttagupta, Aarron T Willingham, Peter F Stadler, Jana Hertel, Joerg Hackermueller, Ivo L Hofacker, Ian Bell, Evelyn Cheung, Jorg Drenkow, Erica Dumais, Sandeep Patel, Gregg Helt, Madhavan Ganesh, Srinka Ghosh, Antonio Piccolboni, Victor Sementchenko, Hari Tammana, Thomas R Gingeras
    posted to array tiling by elfar on 2008-04-14 13:06:06 as ** along with 11 people and 4 groups xingxu marcius alexg dpollard xico mtagaya rdiaz djkt stajich mathijsv asddd EisenLab WetBiology BioinfoCIPF SGU-CIPF
  • Global identification of human transcribed sequences with genome tiling arrays.
    Science, Vol. 306, No. 5705. (24 December 2004), pp. 2242-2246.
    by P Bertone, V Stolc, TE Royce, JS Rozowsky, AE Urban, X Zhu, JL Rinn, W Tongprasit, M Samanta, S Weissman, M Gerstein, M Snyder
    posted to array tiling by elfar on 2008-04-14 13:04:35 as ** along with 3 people and 2 groups miguel kaspermunch nickluscombe Bioinformatics EBI-regulation
  • Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans.
    Nature, Vol. 391, No. 6669. (19 February 1998), pp. 806-811.
    by A Fire, S Xu, MK Montgomery, SA Kostas, SE Driver, CC Mello
    posted to rnai by elfar on 2008-04-14 12:58:52 as ** along with 6 people and 1 group dayjm tardigrade mtagaya raylim shizhao benlin Wikipedia
  • WAR: Webserver for aligning structural RNAs
    Submitted, Vol. XX (2008), pp. XX-XX.
    by E Torarinsson, S Lindgreen
    posted to file-import-08-04-14 by elfar on 2008-04-14 12:51:52 as **
  • An extensive class of small RNAs in Caenorhabditis elegans.
    Science, Vol. 294, No. 5543. (26 October 2001), pp. 862-864.
    by RC Lee, V Ambros
    posted to mirna by elfar on 2008-04-14 12:50:34 as ** along with 2 people and 1 group tardigrade heliopais microRNA
  • An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans.
    Science, Vol. 294, No. 5543. (26 October 2001), pp. 858-862.
    by NC Lau, LP Lim, EG Weinstein, DP Bartel
    posted to mirna by elfar on 2008-04-14 12:49:44 as ** along with 3 people and 1 group tardigrade mtagaya heliopais microRNA
  • Identification of novel genes coding for small expressed RNAs.
    Science, Vol. 294, No. 5543. (26 October 2001), pp. 853-858.
    by M Lagos-Quintana, R Rauhut, W Lendeckel, T Tuschl
    posted to mirna by elfar on 2008-04-14 12:49:05 as ** along with 2 people and 1 group mtagaya heliopais microRNA
  • The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14.
    Cell, Vol. 75, No. 5. (3 December 1993), pp. 843-854.
    by RC Lee, RL Feinbaum, V Ambros
    posted to mirna by elfar on 2008-04-14 12:48:01 as ** along with 5 people ea tardigrade arcticrasta tvdbulck benlin
  • CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice.
    Vol. 22 (1994), pp. 4673-4680.
    by JD Thompson, DG Higgins, TJ Gibson
    posted to bibtex-import by elfar on 2008-04-10 09:52:20 as **
  • Evolutionary trees from DNA sequences: a maximum likelihood approach.
    J Mol Evol, Vol. 17, No. 6. (1981), pp. 368-376.
    by J Felsenstein
    posted to no-tag by elfar on 2008-04-10 09:42:49 as ** along with 7 people and 1 group bpb chrn kaspermunch dquest djkt timflutre dmc Bioinformatics
  • Evolutionary rate at the molecular level.
    Nature, Vol. 217, No. 5129. (17 February 1968), pp. 624-626.
    by M Kimura
    posted to no-tag by elfar on 2008-04-10 09:41:20 as ** along with 1 person timflutre
  • RNA Multi-Structure Landscapes - A Study Based on Temperature Dependent Partition Functions
    EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS, Vol. 22 (1993), pp. 13-24.
    by Sebastian Bonhoeffer, John S Mccaskill, Peter F Stadler, Peter Schuster
    posted to no-tag by elfar on 2008-04-10 09:08:01 as **
  • Alignment of RNA base pairing probability matrices
    Bioinformatics, Vol. 20 (2004), pp. 2222-2227.
    by IL Hofacker, SH Bernhart, PF Stadler
    posted to bibtex-import by elfar on 2008-04-10 08:56:43 as **
  • Abstracts
    Brief Bioinform, Vol. 7, No. 4. (2006), pp. 407-412.
    by King I Jordan
    posted to bibtex-import by elfar on 2008-04-09 15:47:47 as **
  • Structured RNAs in the ENCODE selected regions of the human genome
    Genome Research, Vol. 17 (2007), pp. 852-864.
    by S Washietl, JS Pedersen, JO Korbel, C Stocsits, AR Gruber, J Hackermüller, J Hertel, M Lindemeyer, K Reiche, A Tanzer, C Ucla, C Wyss, SE Antonarakis, F Denoeud, J Lagarde, J Drenkow, P Kapranov, TR Gingeras, R Guigo, M Snyder, MB Gerstein, A Reymond, IL Hofacker, PF Stadler
    posted to bibtex-import by elfar on 2008-04-09 15:46:16 as **
  • Multiple structural alignment and clustering of RNA sequences
    Bioinformatics, Vol. 23 (2007), pp. 926-932.
    by E Torarinsson, JH Havgaard, J Gorodkin
    posted to bibtex-import by elfar on 2008-04-09 15:44:35 as **
  • Thousands of corresponding human and mouse genomic regions unalignable in primary sequence contain common RNA structure
    Genome Research., Vol. 16 (2006), pp. 885-889.
    by E Torarinsson, M Sawera, Havgaard, M Fredholm, J Gorodkin
    posted to bibtex-import by elfar on 2008-04-09 15:43:03 as **
  • Comparative genomics beyond sequence-based alignments: RNA structures in the ENCODE regions
    Genome Res., Vol. 18, No. 2. (2008), pp. 242-251.
    by E Torarinsson, Z Yao, ED Wiklund, JB Bramsen, C Hansen, J Kjems, N Tommerup, WL Ruzzo, J Gorodkin
    posted to bibtex-import by elfar on 2008-04-09 15:38:05 as **
  • Advanced Lectures on Machine Learning, ML Summer Schools 2003, Canberra, Australia, February 2-14, 2003, Tübingen, Germany, August 4-16, 2003, Revised Lectures
    Vol. 3176 (2004)
    edited by Olivier Bousquet, Ulrike von Luxburg, Gunnar Rätsch
    posted to bibtex-import by elfar on 2008-04-09 15:33:44 as **
  • The uRNA database.
    Nucleic Acids Res., Vol. 24, No. 1. (1996), pp. 76-9.
    by C Zwieb
    posted to bibtex-import by elfar on 2008-04-09 15:33:44 as **
  • Mfold web server for nucleic acid folding and hybridization prediction.
    Nucleic Acids Res., Vol. 31, No. 13. (2003), pp. 3406-15.
    by M Zuker
    posted to bibtex-import by elfar on 2008-04-09 15:33:44 as **
  • Algorithms and Thermodynamics for RNA Secondary Structure Prediction: A Practical Guide
    (1999), pp. 11-43.
    by M Zuker, dh Mathews, dh Turner
    posted to bibtex-import by elfar on 2008-04-09 15:33:44 as **
  • On finding all suboptimal foldings of an RNA molecule
    Science, Vol. 244, No. 4900. (1989), pp. 48-52.
    by Michael Zuker
    posted to bibtex-import by elfar on 2008-04-09 15:33:44 as **
  • Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information
    Nucleic Acids Research, Vol. 9, No. 1. (1981), pp. 133-148.
    by Michael Zuker, Patrick Stiegler
    posted to bibtex-import by elfar on 2008-04-09 15:33:44 as **
  • NATsDB: Natural Antisense Transcripts DataBase.
    Nucleic Acids Res. (2006)
    by Y Zhang, J Li, L Kong, G Gao, QR Liu, L Wei
    posted to bibtex-import by elfar on 2008-04-09 15:33:44 as **
    • ◇温馨提示◇本页的引用地址为： http://www.citeulike.org/user/elfar

    Result page: 1 2 3 4 5 6 7 8 9 10 Next RIS BibTeX RSS
    CiteULike organises scholarly (or academic) papers or literature and provides bibliographic (which means it makes bibliographies) for universities and higher education establishments. It helps undergraduates and postgraduates. People studying for PhDs or in postdoctoral (postdoc) positions. The service is similar in scope to EndNote or RefWorks or any other reference manager like BibTeX, but it is a social bookmarking service for scientists and humanities researchers.