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edwardmorrissey's library [26 articles]

最近录入 edwardmorrissey's 文献库.
  • Discovering molecular pathways from protein interaction and gene expression data.
    Bioinformatics, Vol. 19 Suppl 1 (2003)
    by E Segal, H Wang, D Koller
    posted to phd by edwardmorrissey on 2007-12-24 19:36:30 as ** along with 6 people and 1 group jfr lfriedl wnpx noano bhaddow jiny kdl
  • Inferring genetic regulatory logic from expression data.
    Bioinformatics, Vol. 21, No. 11. (1 June 2005), pp. 2706-2713.
    by S Bulashevska, R Eils
    posted to phd by edwardmorrissey on 2007-12-24 19:35:43 as **
  • Dynamic Bayesian network and nonparametric regression for nonlinear modeling of gene networks from time series gene expression data
    Biosystems, Vol. 75, No. 1-3. (July 2004), pp. 57-65.
    by Sunyong Kim, Seiya Imoto, Satoru Miyano
    posted to phd by edwardmorrissey on 2007-12-24 19:34:36 as ** along with 3 people ryang scotts_43035 wnpx
  • Bayesian sparse hidden components analysis for transcription regulation networks
    Bioinformatics, Vol. 22, No. 6. (15 March 2006), pp. 739-746.
    by Chiara Sabatti, Gareth M James
    posted to phd by edwardmorrissey on 2007-12-24 19:33:10 as ** along with 2 people lp2 hms
  • Inferring cellular networks using probabilistic graphical models.
    Science, Vol. 303, No. 5659. (6 February 2004), pp. 799-805.
    by N Friedman
    posted to phd by edwardmorrissey on 2007-12-24 19:31:24 as ** along with 14 people and 1 group srp33 ldfu ujh lfriedl opheliav ryang wnpx nirfriedman neveaire koller helsley dimatura vietanh0 Yumyai kdl
  • A Bayesian approach to reconstructing genetic regulatory networks with hidden factors
    Bioinformatics, Vol. 21, No. 3. (01 February 2005), 349.
    by Matthew J Beal, Francesco Falciani, Zoubin Ghahramani, Claudia Rangel, David L Wild
    posted to phd by edwardmorrissey on 2007-12-24 19:30:00 as ** along with 3 people frohike helsley Borelli
  • Reconstructing gene regulatory networks with bayesian networks by combining expression data with multiple sources of prior knowledge.
    Stat Appl Genet Mol Biol, Vol. 6 (2007)
    by AV Werhli, D Husmeier
    posted to phd by edwardmorrissey on 2007-12-24 19:28:48 as ** along with 1 person roys
  • Sensitivity and specificity of inferring genetic regulatory interactions from microarray experiments with dynamic Bayesian networks.
    Bioinformatics, Vol. 19, No. 17. (22 November 2003), pp. 2271-2282.
    by D Husmeier
    posted to phd by edwardmorrissey on 2007-12-24 19:27:26 as ** along with 2 people wnpx frohike
  • Comparative evaluation of reverse engineering gene regulatory networks with relevance networks, graphical Gaussian models and Bayesian networks.
    Bioinformatics (14 July 2006)
    by Adriano V V Werhli, Marco Grzegorczyk, Dirk Husmeier
    posted to phd by edwardmorrissey on 2007-12-24 19:26:40 as ** along with 3 people wnpx frohike roys
  • Gaussian processes for ordinal regression
    (2004)
    by W Chu, Z Ghahramani
    posted to adipo by edwardmorrissey on 2007-09-25 17:09:07 as ** along with 1 person ecome
  • Biomarker discovery in microarray gene expression data with Gaussian processes
    Bioinformatics, Vol. 21, No. 16. (15 August 2005), pp. 3385-3393.
    by Wei Chu, Zoubin Ghahramani, Francesco Falciani, David L Wild
    posted to adipo by edwardmorrissey on 2007-09-25 17:05:31 as ** along with 1 person Borelli
  • Adipose Tissue as an Endocrine Organ
    J Clin Endocrinol Metab, Vol. 89, No. 6. (1 June 2004), pp. 2548-2556.
    by Erin E Kershaw, Jeffrey S Flier
    posted to adipo by edwardmorrissey on 2007-09-18 15:43:11 as ** along with 1 person brian
  • Integrated analysis of regulatory and metabolic networks reveals novel regulatory mechanisms in Saccharomyces cerevisiae.
    Genome Res, Vol. 16, No. 5. (May 2006), pp. 627-635.
    by MJ Herrgård, BS Lee, V Portnoy, BØ Palsson
    posted to no-tag by edwardmorrissey on 2007-07-03 20:19:56 as ** along with 7 people and 3 groups JeremyZucker nickluscombe aswin kengg koller raiyar cjeans EBI-regulation steinmetzlab Plantandetc
  • Flux balance analysis in the era of metabolomics
    Brief Bioinform, Vol. 7, No. 2. (1 June 2006), pp. 140-150.
    by Jong M Lee, Erwin P Gianchandani, Jason A Papin
    posted to fba by edwardmorrissey on 2007-06-24 16:21:12 as **
  • Reconstruction and validation of Saccharomyces cerevisiae iND750, a fully compartmentalized genome-scale metabolic model.
    Genome Res, Vol. 14, No. 7. (July 2004), pp. 1298-1309.
    by NC Duarte, MJ Herrgård, BØ Palsson
    posted to fba by edwardmorrissey on 2007-06-24 16:19:49 as ** along with 2 people RMGraze westoll
  • Genome-scale reconstruction of the Saccharomyces cerevisiae metabolic network.
    Genome Res, Vol. 13, No. 2. (February 2003), pp. 244-253.
    by J Förster, I Famili, P Fu, BØ Palsson, J Nielsen
    posted to fba by edwardmorrissey on 2007-06-24 16:18:46 as ** along with 7 people and 3 groups opheliav wnpx nirfriedman JeremyZucker bsmagic gcalda jpoyatos Bioinformatics bioinplant MetabolicModeling
  • Metabolic functions of duplicate genes in Saccharomyces cerevisiae.
    Genome Res, Vol. 15, No. 10. (October 2005), pp. 1421-1430.
    by L Kuepfer, U Sauer, LM Blank
    posted to fba by edwardmorrissey on 2007-06-24 16:14:45 as **
  • Multiple knockout analysis of genetic robustness in the yeast metabolic network
    Nature Genetics, Vol. 38, No. 9. (29 August 2006), pp. 993-998.
    by David Deutscher, Isaac Meilijson, Martin Kupiec, Eytan Ruppin
    posted to fba by edwardmorrissey on 2007-06-24 16:05:06 as ** along with 6 people and 1 group hryk tmmurali koller raiyar cjeans patrycja_missiuro steinmetzlab
  • Plasticity of genetic interactions in metabolic networks of yeast
    PNAS, Vol. 104, No. 7. (13 February 2007), pp. 2307-2312.
    by Richard Harrison, Balazs Papp, Csaba Pal, Stephen G Oliver, Daniela Delneri
    posted to fba by edwardmorrissey on 2007-06-24 16:04:09 as **
  • Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox.
    Nat Protoc, Vol. 2, No. 3. (2007), pp. 727-738.
    by SA Becker, AM Feist, ML Mo, G Hannum, BØ Palsson, MJ Herrgard
    posted to fba by edwardmorrissey on 2007-06-24 16:02:29 as ** along with 2 people jyuh alexg
  • Genome-scale models of microbial cells: evaluating the consequences of constraints.
    Nat Rev Microbiol, Vol. 2, No. 11. (November 2004), pp. 886-897.
    by ND Price, JL Reed, BØ Palsson
    posted to fba by edwardmorrissey on 2007-06-24 16:02:16 as **
  • Advances in flux balance analysis.
    Curr Opin Biotechnol, Vol. 14, No. 5. (October 2003), pp. 491-496.
    by KJ Kauffman, P Prakash, JS Edwards
    posted to fba by edwardmorrissey on 2007-06-24 16:01:11 as ** along with 4 people and 5 groups beapen wnpx nirfriedman bsmagic Bioinformatics Atopic_and_Seborrhoeic_Dermatitis Skin_Deep Applied_Bimatics bioinplant
  • Conservation of Expression and Sequence of Metabolic Genes Is Reflected by Activity Across Metabolic States.
    PLoS Comput Biol, Vol. 2, No. 8. (18 August 2006)
    by Yonatan Bilu, Tomer Shlomi, Naama Barkai, Eytan Ruppin
    posted to fba by edwardmorrissey on 2007-06-24 16:00:22 as ** along with 2 people and 2 groups JeremyZucker nickluscombe EBI-regulation MetabolicModeling
  • Modular epistasis in yeast metabolism
    Nature Genetics, Vol. 37, No. 1. (12 December 2004), 77.
    by Daniel Segrè, Alexander Deluna, George M Church, Roy Kishony
    posted to fba by edwardmorrissey on 2007-06-24 15:59:04 as ** along with 6 people tmmurali RMGraze balajis i41m nirfriedman koller
  • Chance and necessity in the evolution of minimal metabolic networks
    Nature, Vol. 440, No. 7084., pp. 667-670.
    by Csaba Pal, Balazs Papp, Martin J Lercher, Pã©ter Csermely, Stephen G Oliver, Laurence D Hurst
    posted to fba by edwardmorrissey on 2007-06-24 15:54:50 as ** along with 8 people and 2 groups michaelbarton icases okarsligil Borelli ccots nirfriedman rabu mikaelhuss Bioinformatics TNT
  • Metabolic network analysis of the causes and evolution of enzyme dispensability in yeast.
    Nature, Vol. 429, No. 6992. (10 June 2004), pp. 661-664.
    by B Papp, C Pál, LD Hurst
    posted to fba by edwardmorrissey on 2007-06-23 12:42:01 as ** along with 5 people Takayuki hryk tmmurali bjorns stefanoallesina
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