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diamantis's genome [26 articles]

当前文献位于 diamantis's 文献库 标签分类为 genome. You can also see everyone's genome.
  • FatiGO +: a functional profiling tool for genomic data. Integration of functional annotation, regulatory motifs and interaction data with microarray experiments
    Nucleic Acids Research, Vol. 35, No. Web Server issue. (2007), pp. W91-W96.
    by Fátima Al-Shahrour, Pablo Minguez, Joaquín Tárraga, Ignacio Medina, Eva Alloza, David Montaner, Joaquín Dopazo
    posted to go genome gene_ontology by diamantis on 2008-11-13 19:07:31 as read
  • FatiGO: a web tool for finding significant associations of Gene Ontology terms with groups of genes
    Bioinformatics, Vol. 20, No. 4. (1 March 2004), pp. 578-580.
    by Fatima Al-Shahrour, Ramon Diaz-Uriarte, Joaquin Dopazo
    posted to go genome gene_ontology by diamantis on 2008-11-13 18:40:58 as read along with 6 people aalibes RMGraze macavity1g Garamonfok ellakat sgoetz
  • Ontological analysis of gene expression data: current tools, limitations, and open problems.
    Bioinformatics, Vol. 21, No. 18. (15 September 2005), pp. 3587-3595.
    by P Khatri, S Drăghici
    posted to go genome gene_ontology by diamantis on 2008-11-12 02:42:45 as ** along with 10 people Cortel dragonrez macavity1g Garamonfok sgoetz heliopais kristen yggdrasil ellakat marck
  • Alu and LINE1 Distributions in the Human Chromosomes: Evidence of Global Genomic Organization Expressed in the Form of Power Laws
    Mol Biol Evol, Vol. 24, No. 11. (1 November 2007), pp. 2385-2399.
    by Diamantis Sellis, Astero Provata, Yannis Almirantis
    posted to tes scaling scale-free retroelement power-law mechanism line genome genes gene evolution alu by diamantis on 2008-11-05 00:24:22 as read along with 2 people and 1 group dchughes cisevol BergmanLab
  • An Exponential Core in the Heart of the Yeast Protein Interaction Network
    Molecular Biology and Evolution, Vol. 22, No. 3. (March 2005), pp. 421-425.
    by Jose B Pereira-Leal, Benjamin Audit, Jose M Peregrin-Alvarez, Christos A Ouzounis
    posted to scale-free protein-protein power-law networks mechanism interactions interaction-network genome gene by diamantis on 2008-11-01 00:16:26 as ** along with 2 people and 1 group wilbur lfriedl kdl
  • Evolution of the yeast protein interaction network
    Proceedings of the National Academy of Sciences, Vol. 100, No. 22. (28 October 2003), pp. 12820-12824.
    by Hong Qin, Henry H Lu, Wei B Wu, Wen-Hsiung Li
    posted to yeast scale-free protein-protein power-law mechanism interactions interaction-network genome gene evolution eukaryots by diamantis on 2008-11-01 00:13:52 as ** along with 2 people davidecellai friendpine
  • Preferential Attachment in the Protein Network Evolution
    Physical Review Letters, Vol. 91, No. 13. (2003), 138701.
    by Eli Eisenberg, Erez Y Levanon
    posted to scale-free protein-protein power-law mechanism interactions interaction-network genome gene by diamantis on 2008-11-01 00:11:45 as **
  • Effect of sampling on topology predictions of protein-protein interaction networks
    Nature Biotechnology, Vol. 23, No. 7. (07 July 2005), pp. 839-844.
    by Jing-Dong J Han, Denis Dupuy, Nicolas Bertin, Michael E Cusick, Marc Vidal
    posted to scaling scale-free protein-protein power-law networks molecular interaction-network genome by diamantis on 2008-10-31 20:31:49 as read along with 13 people cerca snuppepuppan kuhn rabbat gurkanbebek koller eukfn mikaelhuss grahamc cjeans iris_2001 paolomarcatili carlk
  • Evolutionary rate depends on number of protein-protein interactions independently of gene expression level.
    BMC Evol Biol, Vol. 4, No. 1. (27 May 2004)
    by HB Fraser, AE Hirsh
    posted to protein-protein interactions interaction-network genome expression by diamantis on 2008-10-29 00:12:40 as ** along with 1 person bjorns
  • Evolutionary rate depends on number of protein-protein interactions independently of gene expression level: response.
    BMC Evol Biol, Vol. 4 (1 June 2004)
    by JD Bloom, C Adami
    posted to protein-protein interactions interaction-network genome expression by diamantis on 2008-10-29 00:11:53 as ** along with 1 person bjorns
  • Unequal evolutionary conservation of human protein interactions in interologous networks
    Genome Biology, Vol. 8 (29 May 2007), R95.
    by Kevin R Brown, Igor Jurisica
    posted to protein-protein interactions interaction-network htp genome database by diamantis on 2008-10-29 00:05:48 as ** along with 3 people and 1 group grahamc zwang winterschlaefer ParkinsonLab_at_MaRS
  • Online Predicted Human Interaction Database
    Bioinformatics, Vol. 21, No. 9. (1 May 2005), pp. 2076-2082.
    by Kevin R Brown, Igor Jurisica
    posted to protein-protein interactions interaction-network htp genome database by diamantis on 2008-10-29 00:04:55 as ** along with 1 person cerca
  • Network-based global inference of human disease genes
    Mol Syst Biol, Vol. 4 (6 May 2008)
    by Xuebing Wu, Rui Jiang, Michael Q Zhang, Shao Li
    posted to networks interactions interaction-network genome genes disease by diamantis on 2008-10-28 23:26:27 as read along with 9 people tmmurali jfr maralena bootsy biomcgary jyuh zwang ptrobajo Borelli
  • Evolutionary and Physiological Importance of Hub Proteins
    PLoS Computational Biology, Vol. 2, No. 7. (1 July 2006), e88.
    by Nizar N Batada, Laurence D Hurst, Mike Tyers
    posted to protein-protein lethality interactions interaction-network genome genes evolution comparative centrality by diamantis on 2008-10-28 18:10:38 as read along with 7 people davidecellai phoenixzxl aswin IbnBio lpfernandes Evangelia Ema
  • NETWORK BIOLOGY: UNDERSTANDING THE CELL'S FUNCTIONAL ORGANIZATION
    Nat Rev Genet, Vol. 5, No. 2. (February 2004), pp. 101-113.
    by Albert-Laszlo Barabasi, Zoltan N Oltvai
    posted to scaling scale-free protein-protein power-law networks modularity interactions interaction-network genome genes evolution by diamantis on 2008-10-28 17:58:55 as ** along with 10 people and 1 group okarsligil bayesian tny mmt grahamc mirzazadeh lpfernandes karfunkel vietanh0 nolodie Bioinformatics
  • Rate of protein evolution versus fitness effect of gene deletion.
    Mol Biol Evol, Vol. 20, No. 5. (May 2003), pp. 772-774.
    by J Yang, Z Gu, WH Li
    posted to protein-protein interactions interaction-network genome expression evolution by diamantis on 2008-10-28 17:54:51 as ** along with 2 people and 1 group bjorns penka Nie
  • Apparent dependence of protein evolutionary rate on number of interactions is linked to biases in protein-protein interactions data sets.
    BMC Evol Biol, Vol. 3 (2 October 2003)
    by JD Bloom, C Adami
    posted to rate protein-protein interactions interaction-network genome expression by diamantis on 2008-10-28 17:48:12 as ** along with 4 people and 1 group bjorns balajis penka rsantana Nie
  • Gene Loss, Protein Sequence Divergence, Gene Dispensability, Expression Level, and Interactivity Are Correlated in Eukaryotic Evolution -- Krylov et al. 13 (10): 2229 -- Genome Research
    Genome Research, Vol. 13 (2003), pp. 2229-2235.
    by Dmitri M Krylov, Yuri I Wolf, Igor B Rogozin, Eugene V Koonin
    posted to protein-protein loss interactivity interactions interaction-network genome gene expression eukaryots divergence dispensability by diamantis on 2008-10-28 17:44:52 as **
  • Structure and evolution of protein interaction networks: a statistical model for link dynamics and gene duplications.
    BMC Evol Biol, Vol. 4, No. 1. (27 November 2004)
    by J Berg, M Lässig, A Wagner
    posted to protein-protein networks mechanism interactions interaction-network genome by diamantis on 2008-10-28 17:34:58 as ** along with 5 people kaarsinogen phoenixzxl j3xucite timflutre iris_2001
  • Protein complexes and functional modules in molecular networks.
    Proc Natl Acad Sci U S A, Vol. 100, No. 21. (14 October 2003), pp. 12123-12128.
    by V Spirin, LA Mirny
    posted to networks modularity interactions interaction-network genome by diamantis on 2008-10-28 17:29:12 as ** along with 13 people and 4 groups jiny camster kentsis ujh tmmurali dragonrez karfunkel joseph_x_zhou Evangelia grahamc biehl ellakat carlk dbk-lab biophysics HIV_DR bioNetwork_sysBio
  • Modular organization of cellular networks
    Proceedings of the National Academy of Sciences, Vol. 100, No. 3. (4 February 2003), pp. 1128-1133.
    by Alexander W Rives, Timothy Galitski
    posted to protein-protein modularity interactions interaction-network genome by diamantis on 2008-10-28 17:21:32 as ** along with 7 people jiny karfunkel Evangelia stefanoallesina ellakat carlk roys
  • Evidence for dynamically organized modularity in the yeast protein-protein interaction network
    Nature, Vol. 430, No. 6995. (01 July 2004), pp. 88-93.
    by Jing-Dong J Han, Nicolas Bertin, Tong Hao, Debra S Goldberg, Gabriel F Berriz, Lan V Zhang, Denis Dupuy, Albertha JM Walhout, Michael E Cusick, Frederick P Roth, Marc Vidal
    posted to yeast protein-protein modularity interactions interaction-network genome genes by diamantis on 2008-10-28 17:19:55 as ** along with 26 people and 2 groups lawraga davidecellai dragonrez lfriedl balajis yoh j3xucite kintoki koller mikaelhuss ruvido gcalda grahamc iris_2001 lpfernandes winterschlaefer Evangelia cdeane shung phoenixzxl stefanoallesina ellakat frohike shikin ksiek carlk kdl GeneGo
  • Molecular evolution in large genetic networks: does connectivity equal constraint?
    J Mol Evol, Vol. 58, No. 2. (February 2004), pp. 203-211.
    by MW Hahn, GC Conant, A Wagner
    posted to selection rate protein-protein interactions interaction-network genome genes evolution constraint connectivity by diamantis on 2008-10-28 17:13:58 as ** along with 2 people and 1 group penka cjeans Nie
  • Global network analysis of phenotypic effects: protein networks and toxicity modulation in Saccharomyces cerevisiae.
    Proc Natl Acad Sci U S A, Vol. 101, No. 52. (28 December 2004), pp. 18006-18011.
    by MR Said, TJ Begley, AV Oppenheim, DA Lauffenburger, LD Samson
    posted to toxicity protein-protein networks interactions interaction-network genome genes centrality by diamantis on 2008-10-28 17:09:36 as ** along with 2 people and 1 group opheliav cdppublications CDP
  • Asymmetric Functional Divergence of Duplicate Genes in Yeast
    Mol Biol Evol, Vol. 19, No. 10. (1 October 2002), pp. 1760-1768.
    by Andreas Wagner
    posted to protein-protein networks interactions interaction-network genome genes duplications by diamantis on 2008-10-28 16:52:43 as **
  • The mode and tempo of genome size evolution in eukaryotes.
    Genome Res (9 April 2007)
    by Matthew J J Oliver, Dmitri Petrov, David Ackerly, Paul Falkowski, Oscar M M Schofield
    posted to evolution genome size by diamantis on 2008-06-19 21:41:32 as ** along with 4 people and 3 groups aprasad dpollard dchughes lilou EisenLab G4ID Genetics-of-Gambling
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