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RamuAnandakrishnan's coarse_grain [17 articles]

当前文献位于 RamuAnandakrishnan's 文献库 标签分类为 coarse_grain. You can also see everyone's coarse_grain.
  • Mesoscopic models of biological membranes
    Physics Reports, Vol. 437, No. 1-2. (December 2006), pp. 1-54.
    by Maddalena Venturoli, Maddalena, Marieke Kranenburg, Berend Smit
    posted to coarse_grain by RamuAnandakrishnan on 2008-09-04 05:02:14 as ** along with 1 person choonpeng
  • Biological and synthetic membranes: What can be learned from a coarse-grained description?
    Physics Reports, Vol. 434, No. 5-6. (November 2006), pp. 113-176.
    by Marcus Muller, Kirill Katsov, Michael Schick
    posted to coarse_grain by RamuAnandakrishnan on 2008-09-04 04:52:02 as ** along with 1 person loison
  • Multiscale modeling of biomolecular systems: in serial and in parallel
    Current Opinion in Structural Biology, Vol. In Press, Corrected Proof
    by Gary S Ayton, Will G Noid, Gregory A Voth
    posted to coarse_grain by RamuAnandakrishnan on 2008-09-04 04:41:43 as ** along with 2 people aqeel choonpeng
  • Coarse-grained models for proteins.
    Curr Opin Struct Biol, Vol. 15, No. 2. (April 2005), pp. 144-150.
    by V Tozzini
    posted to coarse_grain by RamuAnandakrishnan on 2008-09-04 04:39:25 as ** along with 7 people baaden aqeel ltrabuco simone cottrell choonpeng iantunbridge
  • Implementation of a Serial Replica Exchange Method in a Physics-Based United-Residue (UNRES) Force Field
    J. Chem. Theory Comput., Vol. 4, No. 8. (12 August 2008), pp. 1386-1400.
    by Hujun Shen, Cezary Czaplewski, Adam Liwo, Harold A Scheraga
    posted to coarse_grain by RamuAnandakrishnan on 2008-09-04 04:35:01 as **
  • Dynamics of entangled linear polymer melts: A molecular-dynamics simulation
    The Journal of Chemical Physics, Vol. 92, No. 8. (1990), pp. 5057-5086.
    by Kurt Kremer, Gary S Grest
    posted to coarse_grain md nucleosome by RamuAnandakrishnan on 2008-08-23 14:46:45 as ** along with 3 people kaz229 jheco 6rheology
  • Multiscale Simulation of Soft Matter: From Scale Bridging to Adaptive Resolution
    Annual Review of Physical Chemistry, Vol. 59, No. 1. (2008), pp. 545-571.
    by Matej Praprotnik, Luigi Delle Site, Kurt Kremer
    posted to coarse_grain electrostatics md by RamuAnandakrishnan on 2008-05-21 13:42:03 as ** along with 1 person softsimu
  • Some fundamental problems for an energy conserving adaptive resolution molecular dynamics scheme
    (17 Sep 2007)
    by L Delle Site
    posted to coarse_grain electrostatics md by RamuAnandakrishnan on 2008-04-16 20:41:19 as **
  • Coarse-grained force field for the nucleosome from self-consistent multiscaling
    Journal of Computational Chemistry, Vol. 9999, No. 9999. (2008), NA.
    by Karine Voltz, Joanna Trylska, Valentina Tozzini, Vandana Kurkal-Siebert, Jörg Langowski, Jeremy Smith
    posted to coarse_grain md nucleosome by RamuAnandakrishnan on 2008-02-13 14:39:41 as ** along with 1 person onufriev
  • Discretized model of proteins. I. Monte Carlo study of cooperativity in homopolypeptides
    The Journal of Chemical Physics, Vol. 97, No. 12. (1992), pp. 9412-9426.
    by Andrzej Kolinski, Jeffrey Skolnick
    posted to coarse_grain md by RamuAnandakrishnan on 2007-12-03 19:49:55 as **
  • A united-residue force field for off-lattice protein-structure simulations. I. Functional forms and parameters of long-range side-chain interaction potentials from protein crystal data
    Journal of Computational Chemistry, Vol. 18, No. 7. (1997), pp. 849-873.
    by A Liwo, S Ołdziej, MR Pincus, RJ Wawak, S Rackovsky, HA Scheraga
    posted to coarse_grain md by RamuAnandakrishnan on 2007-12-02 15:24:31 as **
  • Multiscale modeling and simulation methods with applications to dendritic polymers
    Computational and Theoretical Polymer Science, Vol. 11, No. 5. (October 2001), pp. 345-356.
    by Tahir Cagin, Guofeng Wang, Ryan Martin, Georgios Zamanakos, Nagarajan Vaidehi, Daniel T Mainz, William A Goddard
    posted to coarse_grain implicit_solvent md by RamuAnandakrishnan on 2007-12-02 15:00:44 as **
  • A coarse-graining procedure for flexible polymer chains with bonded and nonbonded interactions
    The Journal of Chemical Physics, Vol. 116, No. 18. (2002), pp. 8183-8190.
    by Hiroo Fukunaga, Jun-Ichi Takimoto, Masao Doi
    posted to coarse_grain md by RamuAnandakrishnan on 2007-12-01 21:55:19 as **
  • Mapping of Explicit Atom onto United Atom Potentials
    Macromolecules, Vol. 31, No. 26. (29 December 1998), pp. 9362-9368.
    by JD Mccoy, JG Curro
    posted to coarse_grain md by RamuAnandakrishnan on 2007-11-30 20:58:08 as **
  • Stability and dynamics of virus capsids described by coarse-grained modeling.
    Structure, Vol. 14, No. 12. (December 2006), pp. 1767-1777.
    by A Arkhipov, PL Freddolino, K Schulten
    posted to coarse_grain electrostatics folding md by RamuAnandakrishnan on 2007-11-22 04:42:33 as ** along with 1 person choonpeng
  • Molecular Dynamics Simulations of the Complete Satellite Tobacco Mosaic Virus
    Structure, Vol. 14, No. 3. (March 2006), pp. 437-449.
    by Peter L Freddolino, Anton S Arkhipov, Steven B Larson, Alexander Mcpherson, Klaus Schulten
    posted to coarse_grain md by RamuAnandakrishnan on 2007-11-22 04:10:32 as ** along with 1 person and 2 groups barry structural_bioinformatics Bioinformatics
  • A finite element framework for computation of protein normal modes and mechanical response
    Proteins: Structure, Function, and Bioinformatics, Vol. 9999, No. 9999. (2007), NA.
    by Mark Bathe
    posted to coarse_grain md by RamuAnandakrishnan on 2007-11-15 19:40:24 as ** along with 2 people and 1 group choonpeng skoddet Nielsen group
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