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LeightonP's library [31 articles]

最近录入 LeightonP's ordered by to_read.
  • Emergence of scaling in random networks
    (21 October 1999)
    by Albert-Laszlo Barabasi, Reka Albert
    posted to networks by LeightonP on 2005-01-26 17:18:00 as **** along with 13 people and 4 groups dbk korakot rmj001 Nichtich scis0000001 bigbossman merazzle mmt jaspervoskuilen fbaroni marymcglo peterlikarish dylanwalker streptomyces Philosophy_of_Information dbk-lab Blog_and_Wiki_Research
  • The plant pathogen Erwinia amylovora produces acyl-homoserine lactone signal molecules in vitro and in planta.
    FEMS Microbiol Lett, Vol. 241, No. 2. (15 December 2004), pp. 179-183.
    by V Venturi, C Venuti, G Devescovi, C Lucchese, A Friscina, G Degrassi, C Aguilar, U Mazzucchi
    posted to amylovora erwinia hsl regulation by LeightonP on 2005-01-11 16:11:19 as ***
  • Erwinia chrysanthemi requires a second iron transport route dependent of the siderophore achromobactin for extracellular growth and plant infection
    Molecular Microbiology, Vol. 55, No. 1., 261.
    by Thierry Franza, Bruno Mahe, Dominique Expert
    posted to chrysanthemi erwinia iron siderophore by LeightonP on 2005-01-11 15:58:50 as *** along with 1 person mravensdale
  • An open letter on microarray data from the MGED Society.
    Microbiology, Vol. 150, No. Pt 11. (November 2004), pp. 3522-3524.
    by C Ball, A Brazma, H Causton, S Chervitz, R Edgar, P Hingamp, JC Matese, C Icahn, H Parkinson, J Quackenbush, M Ringwald, SA Sansone, G Sherlock, P Spellman, C Stoeckert, Y Tateno, R Taylor, J White, N Winegarden,
    posted to microarrays by LeightonP on 2004-12-20 11:13:20
  • Involvement of N-acylhomoserine lactones throughout plant infection by Erwinia carotovora subsp. atroseptica (Pectobacterium atrosepticum).
    Mol Plant Microbe Interact, Vol. 17, No. 11. (November 2004), pp. 1269-1278.
    by B Smadja, X Latour, D Faure, S Chevalier, Y Dessaux, N Orange
    posted to atroseptica erwinia hsl lux plant-pathogen regulation by LeightonP on 2004-12-20 10:17:47
  • Evolution of transcription factors and the gene regulatory network in Escherichia coli.
    Nucleic Acids Res, Vol. 31, No. 4. (15 February 2003), pp. 1234-1244.
    by M Madan Babu, SA Teichmann
    posted to evolution networks sysbio transcription by LeightonP on 2004-12-17 16:05:55 along with 3 people hununu kaarsinogen discreteonyxorb
  • Network motifs in integrated cellular networks of transcription-regulation and protein-protein interaction.
    Proc Natl Acad Sci U S A, Vol. 101, No. 16. (20 April 2004), pp. 5934-5939.
    by E Yeger-Lotem, S Sattath, N Kashtan, S Itzkovitz, R Milo, RY Pinter, U Alon, H Margalit
    posted to networks regulation sysbio transcription yeast by LeightonP on 2004-12-17 14:06:32 along with 9 people and 4 groups camster snuppepuppan dbk korakot hununu jtextori koller maralena carlk streptomyces Philosophy_of_Information dbk-lab Blog_and_Wiki_Research
  • Biological robustness.
    Nat Rev Genet, Vol. 5, No. 11. (November 2004), pp. 826-837.
    by H Kitano
    posted to evolution networks regulation sysbio by LeightonP on 2004-12-14 12:19:33 along with 13 people and 5 groups dbk betainverse korakot monod bayesian teuder biosv madhadron nickluscombe anatiferous timflutre ekoenig tomhebbron streptomyces Philosophy_of_Information dbk-lab Blog_and_Wiki_Research EBI-regulation
  • Microbiology. Dynamic instability of a bacterial engine.
    Science, Vol. 306, No. 5698. (5 November 2004), pp. 987-989.
    by J Møller-Jensen, K Gerdes
    posted to bacteria cell-division by LeightonP on 2004-12-14 11:19:29
  • Regulatory small RNAs: the key to coordinating global regulatory circuits.
    J Bacteriol, Vol. 186, No. 20. (October 2004), pp. 6679-6680.
    by S Altuvia
    posted to regulation srna by LeightonP on 2004-12-14 11:08:01
  • The Pfam protein families database.
    Nucleic Acids Res, Vol. 32 Database issue (1 January 2004)
    by A Bateman, L Coin, R Durbin, RD Finn, V Hollich, S Griffiths-Jones, A Khanna, M Marshall, S Moxon, EL Sonnhammer, DJ Studholme, C Yeats, SR Eddy
    posted to hmm protein sequence-structure-function by LeightonP on 2004-12-14 10:42:34 along with 5 people ziquje chad_davis cjeans wenhan gulkur
  • A genetic algorithm for the detection of new cis-regulatory modules in sets of coregulated genes.
    Bioinformatics, Vol. 20, No. 12. (12 August 2004), pp. 1974-1976.
    by S Aerts, P Van Loo, Y Moreau, B De Moor
    posted to genetic-algorithms regulation transcription by LeightonP on 2004-12-13 16:57:48 along with 1 person xili03
  • GC/AT-content spikes as genomic punctuation marks.
    Proc Natl Acad Sci U S A, Vol. 101, No. 48. (30 November 2004), pp. 16855-16860.
    by L Zhang, S Kasif, CR Cantor, NE Broude
    posted to comparative genomics transcription by LeightonP on 2004-12-08 18:04:04
  • Dobzhansky-Muller incompatibilities in protein evolution.
    Proc Natl Acad Sci U S A, Vol. 99, No. 23. (12 November 2002), pp. 14878-14883.
    by AS Kondrashov, S Sunyaev, FA Kondrashov
    posted to covariation evolution protein by LeightonP on 2004-12-08 17:06:26 along with 6 people and 2 groups betainverse mdimmic ccots cmm caporaso ramensky FAB-lab biomedical-nlp
  • Compensated deleterious mutations in insect genomes.
    Science, Vol. 306, No. 5701. (26 November 2004), pp. 1553-1554.
    by RJ Kulathinal, BR Bettencourt, DL Hartl
    posted to covariation evolution protein by LeightonP on 2004-12-08 17:05:43 along with 2 people and 1 group caporaso bpcusack biomedical-nlp
  • Highly conserved upstream sequences for transcription factor genes and implications for the regulatory network.
    Proc Natl Acad Sci U S A (30 November 2004)
    by Hisakazu Iwama, Takashi Gojobori
    posted to comparative genomics networks regulation sysbio transcription by LeightonP on 2004-12-08 15:11:16
  • Genetic networks with canalyzing Boolean rules are always stable.
    Proc Natl Acad Sci U S A (30 November 2004)
    by Stuart Kauffman, Carsten Peterson, Björn Samuelsson, Carl Troein
    posted to networks sysbio by LeightonP on 2004-12-08 14:53:40 along with 3 people and 2 groups camster dbk tumo streptomyces dbk-lab
  • A proposed framework for the description of plant metabolomics experiments and their results
    Nature Biotechnology, Vol. 22, No. 12. (06 December 2004), 1601.
    by Helen Jenkins, Nigel Hardy, Manfred Beckmann, John Draper, Aileen R Smith, Janet Taylor, Oliver Fiehn, Royston Goodacre, Raoul J Bino, Robert Hall, Joachim Kopka, Geoffrey A Lane, Markus M Lange, Jang R Liu, Pedro Mendes, Basil J Nikolau, Stephen G Oliver, Norman W Paton, Sue Rhee, Ute Roessner-Tunali, Kazuki Saito, Jørn Smedsgaard, Lloyd W Sumner, Trevor Wang, Sean Walsh, Eve S Wurtele, Douglas B Kell
    posted to data-model metabolomics by LeightonP on 2004-12-07 15:01:08 along with 9 people and 2 groups dbk irenas betainverse andytseng agileproteomics BIBLIOma dullhunk pmendes katerinakal streptomyces dbk-lab
  • Complete sequence and comparative genome analysis of the dairy bacterium Streptococcus thermophilus
    Nature Biotechnology, Vol. 22, No. 12. (14 November 2004), 1554.
    by Alexander Bolotin, Benoît Quinquis, Pierre Renault, Alexei Sorokin, Dusko D Ehrlich, Saulius Kulakauskas, Alla Lapidus, Eugene Goltsman, Michael Mazur, Gordon D Pusch, Michael Fonstein, Ross Overbeek, Nikos Kyprides, Bénédicte Purnelle, Deborah Prozzi, Katrina Ngui, David Masuy, Frédéric Hancy, Sophie Burteau, Marc Boutry, Jean Delcour, André Goffeau, Pascal Hols
    posted to comparative genomics streptococcus by LeightonP on 2004-12-07 14:53:36 along with 2 people and 2 groups ctc ana structural_bioinformatics Bioinformatics
  • Machine Learning of Functional Class from Phenotype Data
    (2002)
    by A Clare, R King
    posted to functional-prediction machine-learning by LeightonP on 2004-12-07 09:57:43 along with 2 people and 2 groups dbk irenas streptomyces dbk-lab
  • An information-theoretic definition of similarity
    (1998), pp. 296-304.
    by Dekang Lin
    posted to alignment information-theory similarity by LeightonP on 2004-12-07 09:54:16 along with 23 people and 16 groups camster dbk sourada korakot frednicolier parmentierf JacquesC mortimer mote lwilliams jelsas jtextori barry ingo gangli garyfeng okarsligil onlyme gaudan macavity1g Tronhus CitoJam sgoetz streptomyces NU-PRL Philosophy_of_Information UoY-CS-AIG dbk-lab Blog_and_Wiki_Research structural_bioinformatics tulip ReadingLab ASR ISI NLP SLA Bioinformatics LanguageAndBrain AI
  • Network biology: understanding the cell's functional organization.
    Nat Rev Genet, Vol. 5, No. 2. (February 2004), pp. 101-113.
    by AL Barabási, ZN Oltvai
    posted to networks sysbio by LeightonP on 2004-12-07 09:48:34 along with 34 people and 11 groups camster snuppepuppan dbk greg jyuh hununu felciano mague kuhn textoris rhem1224 lfriedl balajis alexg wnpx jknabe adepace nickluscombe bundschu awooga jdiggans jeremymiller uprock timflutre mikaelhuss gcalda grahamc fishtank jayster4 naegele Evangelia heliopais shikin hryk streptomyces spliceml dbk-lab kdl EisenLab TCR_Signaling EBI-regulation SysbioMPI-TCells GeschwindLab generif_paper GeneGo
  • MEG (Model Extender for Gepasi): a program for the modelling of complex, heterogeneous, cellular systems.
    Bioinformatics, Vol. 17, No. 3. (March 2001), pp. 288-289.
    by P Mendes, DB Kell
    posted to mca meg modelling by LeightonP on 2004-12-06 17:33:15 along with 3 people and 2 groups camster dbk pmendes streptomyces dbk-lab
  • Schemes of flux control in a model of Saccharomyces cerevisiae glycolysis.
    Eur J Biochem, Vol. 269, No. 16. (August 2002), pp. 3894-3904.
    by L Pritchard, DB Kell
    posted to glycolysis mca modelling yeast by LeightonP on 2004-12-06 17:32:35 along with 2 people and 2 groups dbk dullhunk streptomyces dbk-lab
  • Signal transduction systems regulating fruit ripening.
    Trends Plant Sci, Vol. 9, No. 7. (July 2004), pp. 331-338.
    by L Adams-Phillips, C Barry, J Giovannoni
    posted to regulation signal-transduction by LeightonP on 2004-12-06 17:30:05
  • Taxonomic aspects of Peronosporaceae inferred from Bayesian molecular phylogenetics
    Canadian Journal of Botany, Vol. 81, No. 7. (1 July 2003), pp. 672-683.
    by M Goker, H Voglmayr, A Riethmuller, M Weisz, F Oberwinkler
    posted to bayesian peronospora phylogenetics phytophthora taxonomy by LeightonP on 2004-12-06 17:26:45
  • Displaying the information contents of structural RNA alignments: the structure logos.
    Comput Appl Biosci, Vol. 13, No. 6. (December 1997), pp. 583-586.
    by J Gorodkin, LJ Heyer, S Brunak, GD Stormo
    posted to alignment rna structure by LeightonP on 2004-12-06 17:24:05 along with 1 person austin
  • Genome sequence of the enterobacterial phytopathogen Erwinia carotovora subsp. atroseptica and characterization of virulence factors.
    Proc Natl Acad Sci U S A, Vol. 101, No. 30. (27 July 2004), pp. 11105-11110.
    by KS Bell, M Sebaihia, L Pritchard, MT Holden, LJ Hyman, MC Holeva, NR Thomson, SD Bentley, LJ Churcher, K Mungall, R Atkin, N Bason, K Brooks, T Chillingworth, K Clark, J Doggett, A Fraser, Z Hance, H Hauser, K Jagels, S Moule, H Norbertczak, D Ormond, C Price, MA Quail, M Sanders, D Walker, S Whitehead, GP Salmond, PR Birch, J Parkhill, IK Toth
    posted to atroseptica carotovora comparative erwinia genome genomics sequence by LeightonP on 2004-12-06 17:22:09
  • Phytophthora infestans enters the genomics era
    (September 2001)
    by PRJ Birch, SC Whisson
    posted to genomics infestans phytophthora by LeightonP on 2004-12-06 17:20:51
  • Employment opportunities for non-coding RNAs.
    FEBS Lett, Vol. 567, No. 1. (1 June 2004), pp. 27-34.
    by C Morey, P Avner
    posted to ncrna regulation transcription by LeightonP on 2004-12-06 17:17:20 along with 3 people and 1 group evaf arcticrasta dortsjennifer ecotoxurbo
  • The secretome of the plant pathogenic bacterium Erwinia chrysanthemi.
    Proteomics, Vol. 4, No. 10. (October 2004), pp. 3177-3186.
    by N Kazemi-Pour, G Condemine, N Hugouvieux-Cotte-Pattat
    posted to chrysanthemi erwinia plant-pathogen proteomics secretome by LeightonP on 2004-12-06 17:16:44
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