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Ao_Li2007's library [40 articles]

最近录入 Ao_Li2007's 文献库.
  • Genetic regulatory networks programming hematopoietic stem cells and erythroid lineage specification.
    Dev Biol, Vol. 294, No. 2. (15 June 2006), pp. 525-540.
    by G Swiers, R Patient, M Loose
    posted to erythroid network regulator by Ao_Li2007 on 2007-03-26 19:49:27 as **
  • Transcriptional regulatory network analysis of developing human erythroid progenitors reveals patterns of coregulation and potential transcriptional regulators.
    Physiol Genomics, Vol. 28, No. 1. (13 December 2006), pp. 114-128.
    by MA Keller, S Addya, R Vadigepalli, B Banini, K Delgrosso, H Huang, S Surrey
    posted to erythroid network regulator by Ao_Li2007 on 2007-03-26 19:44:56 as read
  • A gene expression signature predicts survival of patients with stage I non-small cell lung cancer.
    PLoS Med, Vol. 3, No. 12. (December 2006)
    by Y Lu, W Lemon, PY Liu, Y Yi, C Morrison, P Yang, Z Sun, J Szoke, WL Gerald, M Watson, R Govindan, M You
    posted to cancer microarray signature by Ao_Li2007 on 2007-03-15 14:28:28 as **
  • Genetic regulators of large-scale transcriptional signatures in cancer
    Nature Genetics, Vol. 38, No. 4. (05 March 2006), pp. 421-430.
    by Adam S Adler, Meihong Lin, Hugo Horlings, Dimitry SA Nuyten, Marc J van de Vijver, Howard Y Chang
    posted to cancer copynumber microarray by Ao_Li2007 on 2007-03-12 21:19:31 as *** along with 4 people jfr tuck ccots oelemento
  • Pitfalls in the use of DNA microarray data for diagnostic and prognostic classification.
    J Natl Cancer Inst, Vol. 95, No. 1. (1 January 2003), pp. 14-18.
    by R Simon, MD Radmacher, K Dobbin, LM McShane
    posted to microarray prediction signature by Ao_Li2007 on 2007-03-11 18:15:42 as read along with 4 people aviad_work frohike lyndon akastrin
  • A gene-expression signature as a predictor of survival in breast cancer.
    N Engl J Med, Vol. 347, No. 25. (19 December 2002), pp. 1999-2009.
    by MJ van de Vijver, YD He, LJ van't Veer, H Dai, AA Hart, DW Voskuil, GJ Schreiber, JL Peterse, C Roberts, MJ Marton, M Parrish, D Atsma, A Witteveen, A Glas, L Delahaye, T van der Velde, H Bartelink, S Rodenhuis, ET Rutgers, SH Friend, R Bernards
    posted to cancer microarray signature by Ao_Li2007 on 2007-03-10 01:04:19 as read along with 8 people and 1 group winterschlaefer jfr tuck adelgiglio giovanni frohike lyndon macavity1g GeschwindLab
  • Classification of human breast cancer using gene expression profiling as a component of the survival predictor algorithm.
    Clin Cancer Res, Vol. 10, No. 7. (1 April 2004), pp. 2272-2283.
    by GV Glinsky, T Higashiyama, AB Glinskii
    posted to cancer microarray signature by Ao_Li2007 on 2007-03-10 01:03:42 as read along with 3 people jfr lyndon macavity1g
  • Gene expression profiling predicts clinical outcome of breast cancer.
    Nature, Vol. 415, No. 6871. (31 January 2002), pp. 530-536.
    by LJ van 't Veer, H Dai, MJ van de Vijver, YD He, AA Hart, M Mao, HL Peterse, K van der Kooy, MJ Marton, AT Witteveen, GJ Schreiber, RM Kerkhoven, C Roberts, PS Linsley, R Bernards, SH Friend
    posted to cancer microarray signature by Ao_Li2007 on 2007-03-10 01:02:38 as read along with 12 people and 1 group jfr tuck bedo giovanni frohike lyndon macavity1g winterschlaefer Lara waghsk nedwards jo_davies GeschwindLab
  • Outcome signature genes in breast cancer: is there a unique set?
    Bioinformatics, Vol. 21, No. 2. (15 January 2005), pp. 171-178.
    by L Ein-Dor, I Kela, G Getz, D Givol, E Domany
    posted to cancer microarray signature by Ao_Li2007 on 2007-03-10 01:01:46 as read along with 1 person bedo
  • Prognostic meta-signature of breast cancer developed by two-stage mixture modeling of microarray data.
    BMC Genomics, Vol. 5, No. 1. (2004)
    by R Shen, D Ghosh, AM Chinnaiyan
    posted to cancer microarray signature by Ao_Li2007 on 2007-03-10 01:00:53 as ** along with 1 person macavity1g
  • Oncogenic pathway signatures in human cancers as a guide to targeted therapies
    Nature (06 November 2005)
    by Andrea H Bild, Guang Yao, Jeffrey T Chang, Quanli Wang, Anil Potti, Dawn Chasse, Mary-Beth Joshi, David Harpole, Johnathan M Lancaster, Andrew Berchuck, John A Olson, Jeffrey R Marks, Holly K Dressman, Mike West, Joseph R Nevins
    posted to cancer microarray signature by Ao_Li2007 on 2007-03-10 00:59:35 as ** along with 11 people Yanno jyuh kentsis mfenner ajeffs tuck maryee eckart_bindewald frohike waghsk srp33
  • Gene expression signature in organized and growth-arrested mammary acini predicts good outcome in breast cancer.
    Cancer Res, Vol. 66, No. 14. (15 July 2006), pp. 7095-7102.
    by MV Fournier, KJ Martin, PA Kenny, K Xhaja, I Bosch, P Yaswen, MJ Bissell
    posted to cancer microarray signature by Ao_Li2007 on 2007-03-10 00:57:53 as ** along with 1 person jfr
  • A gene-expression signature to predict survival in breast cancer across independent data sets
    Oncogene, Vol. aop, No. current.
    by A Naderi, AE Teschendorff, NL Barbosa-Morais, SE Pinder, AR Green, DG Powe, JFR Robertson, S Aparicio, IO Ellis, JD Brenton, C Caldas
    posted to cancer microarray signature by Ao_Li2007 on 2007-03-10 00:56:48 as ** along with 3 people and 2 groups jfr ealloza giovanni BioinfoCIPF GeschwindLab
  • Gene signature evaluation as a prognostic tool: challenges in the design of the MINDACT trial.
    Nat Clin Pract Oncol, Vol. 3, No. 10. (October 2006), pp. 540-551.
    by J Bogaerts, F Cardoso, M Buyse, S Braga, S Loi, JA Harrison, J Bines, S Mook, N Decker, P Ravdin, P Therasse, E Rutgers, LJ van 't Veer, M Piccart,
    posted to cancer microarray signature by Ao_Li2007 on 2007-03-10 00:55:39 as ** along with 3 people laral lyndon macavity1g
  • Converting a breast cancer microarray signature into a high-throughput diagnostic test
    BMC Genomics, Vol. 7 (30 October 2006), 278.
    by Annuska M Glas, Arno Floore, Leonie JMJ Delahaye, Anke T Witteveen, Rob CF Pover, Niels Bakx, Jaana ST Lahti-Domenici, Tako J Bruinsma, Marc O Warmoes, Rene Bernards, Lodewyk FA Wessels, Laura
    posted to cancer microarray signature by Ao_Li2007 on 2007-03-10 00:54:34 as ** along with 1 person jfr
  • Differentially expressed genes between primary cancer and paired lymph node metastases predict clinical outcome of node-positive breast cancer patients.
    Breast Cancer Res Treat (23 November 2006)
    by Yumei Feng, Baocun Sun, Xiaoqing Li, Liang Zhang, Yun Niu, Chunhua Xiao, Liansheng Ning, Zhiyi Fang, Yuli Wang, Lina Zhang, Jing Cheng, Wei Zhang, Xishan Hao
    posted to cancer microarray signature by Ao_Li2007 on 2007-03-10 00:53:48 as **
  • Improved breast cancer prognosis through the combination of clinical and genetic markers.
    Bioinformatics, Vol. 23, No. 1. (1 January 2007), pp. 30-37.
    by Y Sun, S Goodison, J Li, L Liu, W Farmerie
    posted to cancer genes microarray signature by Ao_Li2007 on 2007-03-10 00:52:56 as ** along with 2 people jfr shigepong
  • A mouse stromal response to tumor invasion predicts prostate and breast cancer patient survival.
    PLoS ONE, Vol. 1 (2006)
    by M Bacac, P Provero, N Mayran, JC Stehle, C Fusco, I Stamenkovic
    posted to cancer gene microarray signature by Ao_Li2007 on 2007-03-10 00:51:46 as ** along with 2 people jfr macavity1g
  • Heterologous tissue culture expression signature predicts human breast cancer prognosis.
    PLoS ONE, Vol. 2 (2007)
    by ES Park, JS Lee, HG Woo, F Zhan, JH Shih, JD Shaughnessy, J Frederic Mushinski
    posted to cancer genes microarray signature by Ao_Li2007 on 2007-03-10 00:50:48 as ** along with 2 people jfr jayster4
  • Disease-Specific Genomic Analysis: Identifying the Signature of Pathologic Biology.
    Bioinformatics (3 February 2007)
    by Monica Nicolau, Robert Tibshirani, Anne-Lise L Børresen-Dale, Stefanie S S Jeffrey
    posted to gene pathway by Ao_Li2007 on 2007-03-10 00:48:36 as ** along with 1 person jfr
  • Inference of disease-related molecular logic from systems-based microarray analysis.
    PLoS Comput Biol, Vol. 2, No. 6. (16 June 2006)
    by V Varadan, D Anastassiou
    posted to cancer microarray prediction regulation by Ao_Li2007 on 2007-03-09 03:18:58 as *** along with 4 people jfr wnpx macavity1g hani_goodarzi
  • Defining transcriptional networks through integrative modeling of mRNA expression and transcription factor binding data.
    BMC Bioinformatics, Vol. 5 (18 March 2004)
    by F Gao, BC Foat, HJ Bussemaker
    posted to expression gene regulation by Ao_Li2007 on 2007-03-01 20:27:56 as ** along with 7 people and 1 group tmmurali tuck gpalidwor nickluscombe koller mariakmejia tvdbulck EBI-regulation
  • A protein interaction network for pluripotency of embryonic stem cells
    Nature
    by Jianlong Wang, Sridhar Rao, Jianlin Chu, Xiaohua Shen, Dana N Levasseur, Thorold W Theunissen, Stuart H Orkin
    posted to cell network stem by Ao_Li2007 on 2007-02-27 18:21:33 as ** along with 6 people and 2 groups kentsis marcius wnpx yeastyboy iris_2001 tdmckee BioinfoCIPF SGU-CIPF
  • Polycomb silencers control cell fate, development and cancer
    Nature Reviews Cancer, Vol. 6, No. 11., pp. 846-856.
    by Anke Sparmann, Maarten van Lohuizen
    posted to cancer cell regulator stem by Ao_Li2007 on 2007-02-27 18:02:09 as **
  • Control of developmental regulators by polycomb in human embryonic stem cells.
    Cell, Vol. 125, No. 2. (21 April 2006), pp. 301-313.
    by TI Lee, RG Jenner, LA Boyer, MG Guenther, SS Levine, RM Kumar, B Chevalier, SE Johnstone, MF Cole, K Isono, H Koseki, T Fuchikami, K Abe, HL Murray, JP Zucker, B Yuan, GW Bell, E Herbolsheimer, NM Hannett, K Sun, DT Odom, AP Otte, TL Volkert, DP Bartel, DA Melton, DK Gifford, R Jaenisch, RA Young
    posted to cell by Ao_Li2007 on 2007-02-27 17:46:26 as ** along with 5 people and 1 group tuck postrational cconboy nickluscombe inesdesantiago EBI-regulation
  • An empirical Bayes approach to inferring large-scale gene association networks.
    Bioinformatics, Vol. 21, No. 6. (March 2005), pp. 754-764.
    by J Schäfer, K Strimmer
    posted to expression gene regulation by Ao_Li2007 on 2007-02-26 19:19:01 as *** along with 6 people and 1 group gabe_rosser eldan gangli wnpx StatAnika tmmurali tulip
  • A probability-based approach for high-throughput protein phosphorylation analysis and site localization
    Nature Biotechnology, Vol. 24, No. 10. (10 September 2006), pp. 1285-1292.
    by Sean A Beausoleil, Judit Villén, Scott A Gerber, John Rush, Steven P Gygi
    posted to phosphorylation prediction by Ao_Li2007 on 2007-02-26 18:34:35 as *** along with 4 people jyuh wnpx csardas Thomasah
  • Reconstructing gene-regulatory networks from time series, knock-out data, and prior knowledge
    BMC Systems Biology, Vol. 1, No. 1. (2007)
    by Florian Geier, Jens Timmer, Christian Fleck
    posted to network pathway by Ao_Li2007 on 2007-02-26 17:44:12 as *** along with 5 people edwardmorrissey jyuh tuck wnpx ptrobajo
  • Identification of functional modules using network topology and high-throughput data
    BMC Systems Biology, Vol. 1, No. 1. (2007)
    by Igor Ulitsky, Ron Shamir
    posted to network pathway by Ao_Li2007 on 2007-02-26 15:25:41 as read along with 9 people frohike tmmurali dragonrez jfr wnpx lyndon bertelsen ellakat carlk
  • Integrated Assessment and Prediction of Transcription Factor Binding
    PLoS Computational Biology, Vol. 2, No. 6. (1 June 2006), e70.
    by Andreas Beyer, Christopher Workman, Jens Hollunder, Dörte Radke, Ulrich Möller, Thomas Wilhelm, Trey Ideker
    posted to regulation tfs by Ao_Li2007 on 2007-02-20 21:57:10 as *** along with 6 people and 1 group jfr balajis wnpx emilyhare samal reidy EisenLab
  • Drugs, their targets and the nature and number of drug targets
    Nature Reviews Drug Discovery, Vol. 5, No. 10., pp. 821-834.
    by Peter Imming, Christian Sinning, Achim Meyer
    posted to drug target by Ao_Li2007 on 2007-02-15 17:32:11 as ** along with 4 people and 1 group kuhn xdeupi massivemayhem yaredo LabCompMed
  • Technology Insight: tuning into the genetic orchestra using microarrays--limitations of DNA microarrays in clinical practice.
    Nat Clin Pract Oncol, Vol. 3, No. 9. (September 2006), pp. 501-516.
    by A Abdullah-Sayani, JM Bueno-de-Mesquita, MJ van de Vijver
    posted to clinical microarray by Ao_Li2007 on 2007-02-15 17:29:58 as *** along with 2 people jfr dayjm
  • MAQC
    posted to control microarray quality by Ao_Li2007 on 2007-02-15 17:26:34 as **
  • Adaptively inferring human transcriptional subnetworks.
    Mol Syst Biol, Vol. 2 (2006)
    by D Das, Z Nahlé, MQ Zhang
    posted to expression gene regulation by Ao_Li2007 on 2007-02-13 19:37:58 as ** along with 4 people tmmurali wnpx kmdaily heliopais
  • Computational reconstruction of transcriptional regulatory modules of the yeast cell cycle
    BMC Bioinformatics, Vol. 7 (29 September 2006), 421.
    by Wei-Sheng Wu, Wen-Hsiung Li, Bor-Sen Chen
    posted to expression gene regulation by Ao_Li2007 on 2007-02-13 19:02:55 as **
  • Genome-wide prediction of transcriptional regulatory elements of human promoters using gene expression and promoter analysis data
    BMC Bioinformatics, Vol. 7 (04 July 2006), 330.
    by Seon-Young Kim, Yongsung Kim
    posted to expression gene regulation by Ao_Li2007 on 2007-02-13 18:46:04 as ** along with 3 people heliopais jfr xwbcn
  • Mining ChIP-chip data for transcription factor and cofactor binding sites.
    Bioinformatics, Vol. 21 Suppl 1 (June 2005)
    by AD Smith, P Sumazin, D Das, MQ Zhang
    posted to expression gene regulation by Ao_Li2007 on 2007-02-13 18:37:33 as ** along with 2 people dquest blobbybirdman
  • Systematic pathway analysis using high-resolution fitness profiling of combinatorial gene deletions
    Nature Genetics, Vol. 39, No. 2. (07 January 2007), pp. 199-206.
    by Robert P St Onge, Ramamurthy Mani, Julia Oh, Michael Proctor, Eula Fung, Ronald W Davis, Corey Nislow, Frederick P Roth, Guri Giaever
    posted to network pathway by Ao_Li2007 on 2007-02-13 16:24:06 as *** along with 5 people aalibes tmmurali wnpx gwcarter raiyar
  • Interacting models of cooperative gene regulation.
    Proc Natl Acad Sci U S A, Vol. 101, No. 46. (16 November 2004), pp. 16234-16239.
    by D Das, N Banerjee, MQ Zhang
    posted to expression gene regulation by Ao_Li2007 on 2007-02-13 16:08:49 as ** along with 2 people jfr lambda
  • A census of human cancer genes.
    Nat Rev Cancer, Vol. 4, No. 3. (March 2004), pp. 177-183.
    by PA Futreal, L Coin, M Marshall, T Down, T Hubbard, R Wooster, N Rahman, MR Stratton
    posted to cancer genes by Ao_Li2007 on 2007-02-12 17:54:19 as read along with 13 people and 1 group jyuh aalibes jfr bedo ealloza frohike leelarcombe emb51 yeastyboy lyndon kristen Petersarkies cerami BioinfoCIPF
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