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所有的文献@标签 pathway [430 articles]

当前文献的标签分类为: pathway.
  • Structure-based design of a pathway-specific nuclear import inhibitor
    Nature Structural & Molecular Biology, Vol. 14, No. 5. (15 April 2007), pp. 452-454.
    by Ahmet E Cansizoglu, Brittany J Lee, Zi C Zhang, Beatriz MA Fontoura, Yuh M Chook
    posted to design nuclear pathway structure by zwang on 2007-05-08 11:53:58 as **
  • A comprehensive modular map of molecular interactions in RB/E2F pathway
    Mol Syst Biol, Vol. 4 (4 March 2008)
    by Laurence Calzone, Amelie Gelay, Andrei Zinovyev, Francois Radvanyl, Emmanuel Barillot
    posted to interaction pathway by zwang on 2008-03-06 04:31:27 as ** along with 2 people jfr thomaskelder
  • RNA-mediated epigenetic programming of a genome-rearrangement pathway
    Nature (28 November 2007)
    by Mariusz Nowacki, Vikram Vijayan, Yi Zhou, Klaas Schotanus, Thomas G Doak, Laura F Landweber
    posted to epigenetics genome pathway rna by zwang on 2008-01-10 01:42:38 as ** along with 6 people balicea mtagaya sebastien_vigneau margaritis rebeccamancy rschulz
  • A systems biology approach for pathway level analysis
    Genome Res. (4 September 2007), gr.6202607.
    by Sorin Draghici, Purvesh Khatri, Adi L Tarca, Kashyap Amin, Arina Done, Calin Voichita, Constantin Georgescu, Roberto Romero
    posted to network pathway system by zwang on 2007-09-05 04:04:19 as * along with 16 people and 3 groups pengchy tmmurali dragonrez jfr gurkanbebek grahamc shigepong cabbagezs cerami xingxu shikin idonaldson Pao-Yang thomaskelder heliopais AlexanderPico Bioinformatics ParkinsonLab_at_MaRS OPIG
  • Dynamics and Design Principles of a Basic Regulatory Architecture Controlling Metabolic Pathways
    PLoS Biology, Vol. 6, No. 6. (1 June 2008), e146.
    by Chen-Shan Chin, Victor Chubukov, Emmitt R Jolly, Joe Derisi, Hao Li
    posted to metabolism pathway regulatory by zwang on 2008-06-27 04:07:53 as ** along with 4 people djkt marck michaelbarton jjray
  • The liver pharmacological and xenobiotic gene response repertoire
    Mol Syst Biol, Vol. 4 (25 March 2008)
    by Georges Natsoulis, Cecelia I Pearson, Jeremy Gollub, Eynon, Joe Ferng, Ramesh Nair, Radha Idury, May D Lee, Mark R Fielden, Richard J Brennan, Alan H Roter, Kurt Jarnagin
    posted to clustering gene human metabolism pathway by zwang on 2008-03-27 05:07:04 as ** along with 5 people and 1 group jyuh caseybrown aubinhon ptrobajo shikin Integrative_biology_behavior
  • From Pathways Databases to Network Models of Switching Behavior
    PLoS Computational Biology, Vol. 3, No. 9. (1 September 2007), e152.
    by Baltazar D Aguda, Andrew B Goryachev
    posted to database modeling network pathway by zwang on 2007-11-02 08:00:02 as ** along with 3 people bayesian julius Ema
  • Regulatory Pathway Analysis by High-Throughput In Situ Hybridization
    PLoS Genetics, Vol. 3, No. 10. (1 October 2007), e178.
    by Axel Visel, James Carson, Judit Oldekamp, Marei Warnecke, Vladimira Jakubcakova, Xunlei Zhou, Chad A Shaw, Gonzalo Alvarez-Bolado, Gregor Eichele
    posted to clustering experiment pathway regulatory by zwang on 2007-10-22 07:22:15 as **
  • Molecular epidemiology, cancer-related symptoms, and cytokines pathway.
    The lancet oncology, Vol. 9, No. 8. (August 2008), pp. 777-785.
    by CC Reyes-Gibby, X Wu, M Spitz, R Kurzrock, M Fisch, E Bruera, S Shete
    posted to pathway thesis polymorphisms epidemiology cytokines confounder cancer by Zephyrus on 2008-09-15 18:18:20 as ** along with 1 person jyuh
  • The combination of high cyclin E and Skp2 expression in breast cancer is associated with a poor prognosis and the basal phenotype
    Human Pathology, Vol. 39, No. 10. (October 2008), pp. 1431-1437.
    by David Voduc, Torsten O Nielsen, Maggie C Cheang, William D Foulkes
    posted to pathway skp2 phenotype journal-club cyclin-e cancer breast basal by Zephyrus on 2008-09-16 16:36:13 as ** along with 1 group Breast Cancer Reading Club
  • Genetic association analysis of copy-number variation (CNV) in human disease pathogenesis.
    Genomics (23 September 2008)
    by Iuliana Ionita-Laza, Angela J J Rogers, Christoph Lange, Benjamin A A Raby, Charles Lee
    posted to pathway pathogenesis genomics cnv cancer-crosstalk by Zephyrus on 2008-10-06 02:47:31 as ** along with 1 group Roswell Cancer Crosstalk
  • Age-specific differences in oncogenic pathway deregulation seen in human breast tumors.
    PLoS ONE, Vol. 3, No. 1. (2008)
    by CK Anders, CR Acharya, DS Hsu, G Broadwater, K Garman, JA Foekens, Y Zhang, Y Wang, K Marcom, JR Marks, S Mukherjee, JR Nevins, KL Blackwell, A Potti
    posted to pathway oncogene deregulation comparisons cancer breast age by Zephyrus on 2008-10-05 20:54:48 as ** along with 1 person jfr
  • Evaluation of biological pathways involved in chemotherapy response in breast cancer
    Breast Cancer Research, Vol. 10 (29 April 2008), R37.
    by Attila Tordai, Jing Wang, Fabrice Andre, Cornelia Liedtke, Kai Yan, Christos Sotiriou, Gabriel N Hortobagyi, Fraser W Symmans, Lajos Pusztai
    posted to pathway biology subtypes response chemotherapy cancer-crosstalk cancer breast by Zephyrus on 2008-09-09 13:22:05 as **** along with 1 person and 2 groups jfr Breast Cancer Reading Club Breast cancer
  • Cytokine loops driving senescence
    Nature Cell Biology, Vol. 10, No. 8., pp. 887-889.
    by Jiri Bartek, Zdenek Hodny, Jiri Lukas
    posted to pathway cytokines thesis senescence confounder cancer by Zephyrus on 2008-09-16 00:26:13 as ** along with 1 person jyuh
  • Intracellular redox status and oxidative stress: implications for cell proliferation, apoptosis, and carcinogenesis.
    Archives of toxicology, Vol. 82, No. 5. (May 2008), pp. 273-299.
    by JM Matés, JA Segura, FJ Alonso, J Márquez
    posted to pathway thesis stress ros review oxidative inflammation confounder cancer antioxidants by Zephyrus on 2008-09-15 18:29:14 as ** along with 1 person jyuh
  • Cancer is a Preventable Disease that Requires Major Lifestyle Changes.
    Pharmaceutical research, Vol. 25, No. 9. (September 2008), pp. 2097-2116.
    by P Anand, AB Kunnumakara, C Sundaram, KB Harikumar, ST Tharakan, OS Lai, B Sung, BB Aggarwal
    posted to pathway thesis review prevention modifiable lifestyle inflammation etiology cancer by Zephyrus on 2008-09-15 18:34:10 as ** along with 2 people and 1 group misonneh jyuh Roswell Cancer Crosstalk
  • Meta-analysis of human cancer microarrays reveals GATA3 is integral to the estrogen receptor alpha pathway
    Molecular Cancer, Vol. 7 (04 June 2008), 49.
    by Brian J Wilson, Vincent Giguere
    posted to pathway thesis receptor microarray immunology gata3 estrogen cancer breast by Zephyrus on 2008-10-05 21:00:09 as ** along with 1 person jfr
  • Pathways connecting inflammation and cancer
    Current Opinion in Genetics & Development, Vol. 18, No. 1. (February 2008), pp. 3-10.
    by Paola Allavena, Cecilia Garlanda, Maria G Borrello, Antonio Sica, Alberto Mantovani
    posted to pathway inflammation cancer-crosstalk cancer by Zephyrus on 2008-09-15 05:42:36 as ** along with 2 people and 1 group jyuh olberd Roswell Cancer Crosstalk
  • An integrative approach to characterize disease-specific pathways and their coordination: a case study in cancer.
    BMC genomics, Vol. 9 Suppl 1 (2008)
    by M Xu, MC Kao, J Nunez-Iglesias, JR Nevins, M West, XJ Zhou
    posted to pathway molecular cancer breast by Zephyrus on 2008-10-05 20:33:25 as ** along with 3 people jyuh cswinburne jfr
  • Reactive oxygen species and angiogenesis: NADPH oxidase as target for cancer therapy.
    Cancer letters, Vol. 266, No. 1. (18 July 2008), pp. 37-52.
    by M Ushio-Fukai, Y Nakamura
    posted to pathway web-study stress ros cancer antioxidants angiogenesis by Zephyrus on 2008-09-15 18:29:58 as ** along with 1 person jyuh
  • Pathway analysis of gene signatures predicting metastasis of node-negative primary breast cancer
    BMC Cancer, Vol. 7 (25 September 2007), 182.
    by Jack X Yu, Anieta M Sieuwerts, Yi Zhang, John WM Martens, Marcel Smid, Jan GM Klijn, Yixin Wang, John A Foekens
    posted to signature pathway node negative metastasis gene-expression cancer breast by Zephyrus on 2008-10-05 20:34:58 as ** along with 2 people and 1 group jfr ealloza BioinfoCIPF
  • Carcinogenic metal compounds: recent insight into molecular and cellular mechanisms.
    Archives of toxicology, Vol. 82, No. 8. (August 2008), pp. 493-512.
    by D Beyersmann, A Hartwig
    posted to pathway review metals exposure cancer by Zephyrus on 2008-09-15 18:27:29 as ** along with 1 person jyuh
  • Hyaluronan in human tumors: pathobiological and prognostic messages from cell-associated and stromal hyaluronan.
    Seminars in cancer biology, Vol. 18, No. 4. (August 2008), pp. 288-295.
    by RH Tammi, A Kultti, VM Kosma, R Pirinen, P Auvinen, MI Tammi
    posted to pathway tumour stroma microenvironment hyaluronan cancer by Zephyrus on 2008-09-15 18:31:16 as ** along with 1 person jyuh
  • Dynamical pathway analysis
    BMC Systems Biology, Vol. 2, No. 1. (2008)
    by Hao Xiong, Yoonsuck Choe
    posted to pathway by Yumyai on 2008-04-14 10:19:00 as ** along with 2 people renatomilani smgomez
  • Ischemic preconditioning, insulin, and morphine all cause hexokinase redistribution.
    Am J Physiol Heart Circ Physiol, Vol. 289, No. 1. (July 2005)
    by CJ Zuurbier, O Eerbeek, AJ Meijer
    posted to cardioprotection opioid pathway by Yachao on 2008-03-04 04:20:37 as *****
  • Signaling pathways in ischemic preconditioning
    Heart Failure Reviews, Vol. 12, No. 3-4. (December 2007), pp. 181-188.
    by Downey, James, Davis, Amanda, Cohen, Michael
    posted to pathway by Yachao on 2008-03-04 04:18:00 as ***
  • Transient limb ischemia induces remote preconditioning and remote postconditioning in humans by a K(ATP)-channel dependent mechanism.
    Circulation, Vol. 116, No. 12. (18 September 2007), pp. 1386-1395.
    by SP Loukogeorgakis, R Williams, AT Panagiotidou, SK Kolvekar, A Donald, TJ Cole, DM Yellon, JE Deanfield, RJ MacAllister
    posted to cardioprotection pathway vif by Yachao on 2008-03-06 04:00:31 as *****
  • The K(Ca) channel as a trigger for the cardioprotection induced by kappa-opioid receptor stimulation -- its relationship with protein kinase C.
    Br J Pharmacol, Vol. 145, No. 7. (August 2005), pp. 984-991.
    by CM Cao, M Chen, TM Wong
    posted to pathway by Yachao on 2008-03-04 03:31:26 as ****
  • Hotspots of transcription factor colocalization in the genome of Drosophila melanogaster.
    Proc Natl Acad Sci U S A (31 July 2006)
    by Celine Moorman, Ling V V Sun, Junbai Wang, Elzo de Wit, Wendy Talhout, Lucas D D Ward, Frauke Greil, Xiang-Jun J Lu, Kevin P P White, Harmen J J Bussemaker, Bas van Steensel
    posted to interaction pathway tf transcriptome by xwbcn on 2006-10-12 13:20:52 as ** along with 4 people and 4 groups ana indigoviolet johncumbers wrowell structural_bioinformatics Bioinformatics EisenLab Cline_lab
  • From the Cover: Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
    PNAS, Vol. 102, No. 43. (25 October 2005), pp. 15545-15550.
    by Aravind Subramanian, Pablo Tamayo, Vamsi K Mootha, Sayan Mukherjee, Benjamin L Ebert, Michael A Gillette, Amanda Paulovich, Scott L Pomeroy, Todd R Golub, Eric S Lander, Jill P Mesirov
    posted to chip data_mining human microarray pathway by xwbcn on 2006-08-16 10:28:45 as *** along with 22 people and 4 groups chrisamiller dragonrez jfr balajis maryee hpiwowar aviad_work ealloza jdiggans jeremymiller frohike hawkeyehammer schuylrp natstreet heliopais shikin waghsk roys ellakat srp33 sgoetz AbnerCYH Bioinformatics BioinfoCIPF GeschwindLab Indigene
  • Building pathway clusters from Random Forests classification using class votes
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Herbert Pang, Hongyu Zhao
    posted to classification pathway by xtizon on 2008-02-14 12:03:21 as ** along with 4 people thomaskelder jyuh jfr AlexanderPico
  • Neurobiology of addiction and implications for treatment.
    Br J Psychiatry, Vol. 182 (February 2003), pp. 97-100.
    by A Lingford-Hughes, D Nutt
    posted to addiction mechanism molecular neurobiology pathway review treatment by xico on 2006-03-25 21:27:45 as *** along with 1 person and 1 group quianominorleo WetBiology
  • The gene controlling marijuana psychoactivity: molecular cloning and heterologous expression of Delta1-tetrahydrocannabinolic acid synthase from Cannabis sativa L.
    The Journal of biological chemistry, Vol. 279, No. 38. (17 September 2004), pp. 39767-39774.
    by S Sirikantaramas, S Morimoto, Y Shoyama, Y Ishikawa, Y Wada, Y Shoyama, F Taura
    posted to biosynthesis biotechnology cannabidiol cannabigerol cannabinoid cannabinol cannabis cbg cloning hairy marijuana pathway roots sativa synthase tetrahydrocannabinol thc thca by xico on 2008-05-13 01:08:07 as read
  • Is there a common molecular pathway for addiction?
    Nature Neuroscience, Vol. 8, No. 11. (26 October 2005), pp. 1445-1449.
    by Eric J Nestler
    posted to addiction common dopamine drug mechanism moleculer pathway by xico on 2006-03-25 21:21:59 as **** along with 1 person and 1 group psique WetBiology
  • Illuminating drug discovery with biological pathways.
    FEBS Lett, Vol. 579, No. 8. (21 March 2005), pp. 1872-1877.
    by G Apic, T Ignjatovic, S Boyer, RB Russell
    posted to drugdiscovery pathway systemsbiology by wnpx on 2006-01-30 20:07:30 as ** along with 5 people kuhn Borelli chad_davis mikaelhuss renatomilani
  • Modelling regulatory pathways in E. coli from time series expression profiles.
    Bioinformatics, Vol. 18 Suppl 1 (2002)
    by IM Ong, JD Glasner, D Page
    posted to expressiondata inference network pathway timeseries by wnpx on 2005-12-29 17:12:52 as *** along with 1 person balicea
  • Analysis and modelling of signal transduction pathways in systems biology.
    Biochem Soc Trans, Vol. 31, No. Pt 6. (December 2003), pp. 1503-1509.
    by KH Cho, O Wolkenhauer
    posted to pathway sec-background-sysbio signaling sysbio systemsbiology by wnpx on 2006-01-30 17:09:54 as ** along with 1 person and 2 groups rhem1224 TCR_Signaling SysbioMPI-TCells
  • Bayesian network approach to cell signaling pathway modeling.
    Sci STKE, Vol. 2002, No. 148. (3 September 2002)
    by K Sachs, D Gifford, T Jaakkola, P Sorger, DA Lauffenburger
    posted to bayesian hypothesis netwokr pathway signaling by wnpx on 2006-07-30 16:50:10 as ** along with 3 people dragonrez noano saman_vp
  • Representations of molecular pathways: an evaluation of SBML, PSI MI and BioPAX
    Bioinformatics, Vol. 21, No. 24. (15 December 2005), pp. 4401-4407.
    by Lena Strömbäck, Patrick Lambrix
    posted to biopax data dt format pathway psi-mi representation sbml by wnpx on 2007-10-17 19:19:55 as ** along with 3 people and 2 groups kuhn balajis dagmar dIEMoSIRIS compneur
  • PAX of mind for pathway researchers.
    Drug Discov Today, Vol. 10, No. 13. (1 July 2005), pp. 937-942.
    by JS Luciano
    posted to biopax data dt format pathway representation by wnpx on 2006-11-17 15:55:21 as ** along with 3 people balajis dullhunk lenov
  • A computational approach for ordering signal transduction pathway components from genomics and proteomics Data.
    BMC Bioinformatics, Vol. 5 (25 October 2004)
    by Y Liu, H Zhao
    posted to dataintegration expressiondata pathway proteininteractiondata proteininteractions signaling by wnpx on 2006-01-02 16:26:09 as ** along with 2 people opheliav gurkanbebek
  • Modeling of cell signaling pathways in macrophages by semantic networks.
    BMC Bioinformatics, Vol. 5 (19 October 2004)
    by M Hsing, JL Bellenson, C Shankey, A Cherkasov
    posted to modeling pathway semanticnetwork signaling by wnpx on 2006-07-20 15:55:57 as **
  • Discovering molecular pathways from protein interaction and gene expression data.
    Bioinformatics, Vol. 19 Suppl 1 (2003)
    by E Segal, H Wang, D Koller
    posted to bio expressiondata gene interactiondata learning network pathway protein structure by wnpx on 2006-05-28 15:49:04 as ** along with 6 people and 1 group jfr lfriedl noano bhaddow edwardmorrissey jiny kdl
  • Efficient algorithms for detecting signaling pathways in protein interaction networks.
    J Comput Biol, Vol. 13, No. 2. (March 2006), pp. 133-144.
    by J Scott, T Ideker, RM Karp, R Sharan
    posted to interaction network pathway protein signaling by wnpx on 2006-07-30 16:47:42 as ** along with 4 people gurkanbebek koller iris_2001 carlk
  • A Bayesian method for identifying missing enzymes in predicted metabolic pathway databases.
    BMC Bioinformatics, Vol. 5, No. 1. (9 June 2004)
    by ML Green, PD Karp
    posted to bayesian enzyme metabolism pathway by wnpx on 2006-07-26 20:53:49 as ** along with 4 people tmmurali eweaver shung JeremyZucker
  • Identification of SP5 as a downstream gene of the beta-catenin/Tcf pathway and its enhanced expression in human colon cancer.
    Int J Oncol, Vol. 27, No. 6. (December 2005), pp. 1483-1487.
    by M Takahashi, Y Nakamura, K Obama, Y Furukawa
    posted to beta-catenin cancer colon microarray pathway tcf by waszak on 2008-02-06 11:56:47 as **
  • A search engine to identify pathway genes from expression data on multiple organisms
    BMC Systems Biology, Vol. 1, No. 1. (2007)
    by Chunnuan Chen, Matthew Weirauch, Corey Powell, Alexander Zambon, Joshua Stuart
    posted to microarray pathway software by waszak on 2007-11-13 21:56:28 as ***** along with 6 people and 1 group tharris jyuh tmmurali jfr rsandie AlexanderPico C. elegans / WormBase
  • Eu.Gene Analyzer a tool for integrating gene expression data with pathway databases.
    Bioinformatics (28 June 2007)
    by Duccio Cavalieri, Cinzia Castagnini, Simona Toti, Karolina Maciag, Thomas Kelder, Luca Gambineri, Samuele Angioli, Piero Dolara
    posted to microarray pathway software by waszak on 2007-11-13 21:06:24 as ** along with 6 people jyuh tmmurali jfr aviad_work AlexanderPico thomaskelder
  • Development and audit of a care pathway for the management of patients with suspected malignant spinal cord compression
    Physiotherapy, Vol. 90, No. 1. (March 2004), pp. 27-34.
    by NJ Pease, RJ Harris, IG Finlay
    posted to audit care compression cord malignant pathway spinal by ulscm on 2006-01-27 12:20:57 as read
  • Biochemical interactions in the wnt pathway.
    Biochim Biophys Acta, Vol. 1495, No. 2. (2 February 2000), pp. 168-182.
    by MJ Seidensticker, J Behrens
    posted to pathway wnt by UlrikeSack on 2007-11-06 12:32:38 as ***
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